Parental gene:

Ap1s3, ENSMUSG00000054702

Aliases:Ap1s3, 1190009B22, Jr2, [s]3A
Description:adaptor-related protein complex AP-1, sigma 3 [Source:MGI Symbol;Acc:MGI:1891304]
Organism:Mouse (Mus musculus)
Coordinates:1:79606875..79671972(-)


>ENSMUSG00000054702
ATGATACATTTCATCTTGCTCTTCAGTCGACAAGGGAAGCTGCGGCTGCAGAAATGGTACACCACACTCCCTGACAAGGA
GAGGAAGAAGATCACCCGCGACATCATCCAGACCGTCCTCTCTCGTGGGCACAGGACCAGCAGCTTCATTGACTGGAAGG
AGCTGAAACTTGTTTATAAAAGGTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAAGACAATGAGCTCTTGACA
CTAGAGATTGTTCATCGTTATGTGGAGTTGCTGGATAAATACTTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTT
TGAAAAGGCATATTTTATCCTTGATGAGTTTATAATAGGTGGAGAAATTCAGGAAACATCCAAGAAAACAGCAGTCAAGG
CCATTGAAGACTCTGATATGTTACAAGAGACAATGGAAGAATACATGAACAAGCCCACGTTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 1 .75 RPM
SRP007412_cerebellum 0 .87 RPM
SRP007412_heart 0 .34 RPM
SRP007412_kidney 6 .43 RPM
SRP007412_liver 0 .71 RPM
SRP007412_testis 0 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011939 ortholog_one2one 5 retrogenes
retro_chof_113, retro_chof_1230, retro_chof_1299, retro_chof_1949, retro_chof_2099,
Callithrix jacchus ENSCJAG00000012352 ortholog_one2one 2 retrogenes
retro_cjac_3187, retro_cjac_3903,
Macropus eugenii ENSMEUG00000016580 ortholog_one2one 11 retrogenes
retro_meug_1074, retro_meug_1342, retro_meug_1488, retro_meug_168, retro_meug_1864, retro_meug_289, retro_meug_318, retro_meug_361, retro_meug_816, retro_meug_909, retro_meug_938,
Microcebus murinus ENSMICG00000014406 ortholog_one2one 1 retrogene
retro_mmur_1492,
Monodelphis domestica ENSMODG00000021198 ortholog_one2one 1 retrogene
retro_mdom_1427,
Mus musculus ENSMUSG00000008036 within_species_paralog 1 retrogene
retro_mmus_2739,
Ochotona princeps ENSOPRG00000013358 ortholog_one2one 1 retrogene
retro_opri_443,
Pan troglodytes ENSPTRG00000012979 ortholog_one2one 1 retrogene
retro_ptro_2258,
Sarcophilus harrisii ENSSHAG00000010973 ortholog_one2one 1 retrogene
retro_shar_695,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_487 97.42 100.00
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2. retro_mmus_2202 93.28 87.01
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3. retro_mmus_2799 92.74 79.87
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Download FASTA sequences of all ENSMUSG00000054702 retrocopies