Parental gene:

Rab7, ENSMUSG00000079477

Aliases:Rab7, Rab7a
Description:RAB7, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105068]
Organism:Mouse (Mus musculus)
Coordinates:6:87999105..88045270(-)


>ENSMUSG00000079477
ATGACCTCTAGGAAGAAAGTGTTGCTGAAGGTCATCATCCTGGGGGACTCTGGTGTTGGAAAGACCTCTCTCATGAACCA
GTATGTGAACAAGAAGTTCAGTAACCAGTACAAAGCCACAATAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGACG
ACAGACTTGTTACCATGCAGATCTGGGACACAGCCGGTCAAGAACGGTTCCAGTCTCTTGGTGTGGCCTTCTACAGAGGT
GCAGATTGCTGTGTTCTGGTGTTTGATGTGACTGCCCCCAACACTTTCAAAACCCTCGACAGCTGGAGAGACGAGTTTCT
CATCCAGGCCAGCCCCCGGGATCCCGAGAACTTCCCTTTTGTTGTGTTGGGAAACAAGATTGACCTGGAAAACAGACAAG
TGGCCACAAAGAGGGCACAGGCTTGGTGCTACAGCAAAAACAACATTCCTTACTTCGAGACCAGTGCCAAGGAGGCCATC
AATGTGGAGCAGGCCTTCCAGACAATTGCTCGGAATGCCCTTAAACAGGAAACAGAAGTGGAACTGTACAATGAATTCCC
TGAACCCATCAAACTGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAGCTGCAGTTGTTGA

Library Parental gene expression (RPM)
SRP007412_brain 155 .20 RPM
SRP007412_cerebellum 138 .69 RPM
SRP007412_heart 129 .72 RPM
SRP007412_kidney 191 .40 RPM
SRP007412_liver 128 .73 RPM
SRP007412_testis 24 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000365 ortholog_one2one 1 retrogene
retro_chof_13,
Felis catus ENSFCAG00000022971 ortholog_one2one 2 retrogenes
retro_fcat_661, retro_fcat_76,
Meleagris gallopavo ENSMGAG00000007208 ortholog_one2one 1 retrogene
retro_mgal_7,
Myotis lucifugus ENSMLUG00000008454 ortholog_one2one 1 retrogene
retro_mluc_1641,
Mustela putorius furo ENSMPUG00000017333 ortholog_one2one 1 retrogene
retro_mputfur_1169,
Oryctolagus cuniculus ENSOCUG00000001645 ortholog_one2many 1 retrogene
retro_ocun_259,
Pongo abelii ENSPPYG00000013431 ortholog_one2one 1 retrogene
retro_pabe_90,
Rattus norvegicus ENSRNOG00000012247 ortholog_one2one 1 retrogene
retro_rnor_2779,
Sarcophilus harrisii ENSSHAG00000016787 ortholog_one2one 1 retrogene
retro_shar_65,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3339 99.03 100.00
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2. retro_mmus_3546 66.44 71.50
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Download FASTA sequences of all ENSMUSG00000079477 retrocopies