Parental gene:

RAB7A, ENSPPYG00000013431

Aliases:RAB7A, RAB7
Description:ras-related protein Rab-7a [Source:RefSeq peptide;Acc:NP_001127416]
Organism:Orangutan (Pongo abelii)
Coordinates:3:3847140..3865745(-)


>ENSPPYG00000013431
ATGACCTCTAGGAAGAAAGTGTTGCTGAAGGTTATCATCCTGGGAGATTTCTGGGTAATCGGGAAGACATCACTCATGAA
CCAGTATGTGAATAAGAAATTCAGCAATCAGTACAAAGCCACAATAGGAGCTGACTTTCTGACAAAGGAGGTGATGGTGG
ATGACAGGCTAGTCACAATGCAGATATGGGACACAGCAGGACAGGAACGGTTCCAGTCTCTCGGTGTGGCCTTCTACAGA
GGTGCAGACTGCTGCGTTCTGGTATTTGATGTGACTGCCCCCAACACATTCAAAACCCTAGATAGCTGGAGAGATGAGTT
TCTCATCCAGGCCAGTCCCCGAGATCCTGAAAACTTCCCCTTTGTTGTGTTGGGAAACAAGATTGACCTCGAAAACAGAC
AAGTGGCCACAAAGCGGGCACAGGCCTGGTGCTACAGCAAAAACAACATTCCCTACTTTGAGACCAGTGCCAAGGAGGCC
ATCAACGTGGAGCAGGCGTTCCAGACGATTGCACGGAATGCACTTAAGCAGGAAACGGAGGTGGAGCTGTACAACGAATT
TCCTGAACCTATCAAACTGGACAAGAATGACCGGGCCAAGGCCTCGGCAGAAAGCTGCAGTTGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 181 .19 RPM
SRP007412_cerebellum 103 .12 RPM
SRP007412_heart 54 .94 RPM
SRP007412_kidney 139 .12 RPM
SRP007412_liver 98 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000365 ortholog_one2one 1 retrogene
retro_chof_13,
Felis catus ENSFCAG00000022971 ortholog_one2one 2 retrogenes
retro_fcat_661, retro_fcat_76,
Meleagris gallopavo ENSMGAG00000007208 ortholog_one2one 1 retrogene
retro_mgal_7,
Myotis lucifugus ENSMLUG00000008454 ortholog_one2one 1 retrogene
retro_mluc_1641,
Mustela putorius furo ENSMPUG00000017333 ortholog_one2one 1 retrogene
retro_mputfur_1169,
Mus musculus ENSMUSG00000079477 ortholog_one2one 2 retrogenes
retro_mmus_3339, retro_mmus_3546,
Oryctolagus cuniculus ENSOCUG00000001645 ortholog_one2many 1 retrogene
retro_ocun_259,
Pongo abelii ENSPPYG00000003752 other_paralog 1 retrogene
retro_pabe_1495,
Rattus norvegicus ENSRNOG00000012247 ortholog_one2one 1 retrogene
retro_rnor_2779,
Sarcophilus harrisii ENSSHAG00000016787 ortholog_one2one 1 retrogene
retro_shar_65,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_90 56.42 86.47
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Download FASTA sequences of all ENSPPYG00000013431 retrocopies