Parental gene:

ENSG00000241343, ENSNLEG00000007540

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397395.1:2715001..2721734(+)


>ENSNLEG00000007540
ATGATTGCTCCTACCGACTCCCATGAGGAAGTGCGATCCGGAACCTCCTATATACTTCCGTTTGCGGCGCAGTTTCTTTC
TTTCCGTGCCGATAACGCTCACGCAAGCATGGTTAACGTCCCTAAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGC
ACCAACCCCATAAAGTGACACAGTACAAGAAGGGCAAGGATTCTCTGTATGCCCAGGGAAAGCGGCGTTATGACAGGAAG
CAGAGTGGCTATGGTGGGCAAACTAAGCCAATTTTCCGGAAAAAGGCTAAAACTACAAAGAAGATTGTCCTAAGGCTTGA
GTGCGTTGAGCCCAACTGCAGATCTAAGAGAATGCTGGCTATTAAAAGATGCAAGCATTTTGAACTGGGAGGAGATAAGA
AGAGAAAGGTATATAATTACGGGTGGAAGGTGCAATCTTTTTCATAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008503 possible_ortholog 1 retrogene
retro_acar_98,
Ailuropoda melanoleuca ENSAMEG00000009384 ortholog_one2one 1 retrogene
retro_amel_85,
Callithrix jacchus ENSCJAG00000004864 possible_ortholog 4 retrogenes
retro_cjac_304, retro_cjac_353, retro_cjac_55, retro_cjac_72,
Equus caballus ENSECAG00000015464 possible_ortholog 9 retrogenes
retro_ecab_129, retro_ecab_131, retro_ecab_204, retro_ecab_219, retro_ecab_265, retro_ecab_268, retro_ecab_294, retro_ecab_543, retro_ecab_646,
Homo sapiens ENSG00000257529 ortholog_one2one 1 retrogene
retro_hsap_1353,
Monodelphis domestica ENSMODG00000025578 possible_ortholog 2 retrogenes
retro_mdom_1878, retro_mdom_971,
Otolemur garnettii ENSOGAG00000004551 ortholog_one2one 6 retrogenes
retro_ogar_1160, retro_ogar_1681, retro_ogar_2390, retro_ogar_2519, retro_ogar_294, retro_ogar_470,
Pteropus vampyrus ENSPVAG00000001569 possible_ortholog 1 retrogene
retro_pvam_17,
Rattus norvegicus ENSRNOG00000011494 possible_ortholog 1 retrogene
retro_rnor_259,
Sarcophilus harrisii ENSSHAG00000013479 possible_ortholog 1 retrogene
retro_shar_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_153 74.80 82.43
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2. retro_nleu_157 79.03 82.43
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3. retro_nleu_178 66.09 76.35
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4. retro_nleu_385 62.12 87.84
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5. retro_nleu_453 90.08 81.76
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6. retro_nleu_644 71.30 72.97
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7. retro_nleu_805 79.03 82.43
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8. retro_nleu_842 86.07 82.43
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9. retro_nleu_991 79.28 75.00
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10. retro_nleu_1003 75.57 88.51
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11. retro_nleu_1243 77.42 83.11
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12. retro_nleu_1291 86.49 73.65
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13. retro_nleu_1632 73.27 66.89
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14. retro_nleu_1833 75.26 65.54
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15. retro_nleu_1903 79.63 72.97
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16. retro_nleu_1959 78.23 82.43
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17. retro_nleu_2145 71.72 66.22
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18. retro_nleu_2345 71.74 62.16
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19. retro_nleu_2381 91.89 74.32
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20. retro_nleu_2699 90.68 79.73
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21. retro_nleu_2965 76.61 82.43
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22. retro_nleu_2995 83.70 60.81
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23. retro_nleu_2996 87.10 61.49
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24. retro_nleu_3027 75.81 82.43
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25. retro_nleu_3028 77.42 82.43
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26. retro_nleu_3059 78.57 74.32
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27. retro_nleu_3111 79.03 82.43
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Download FASTA sequences of all ENSNLEG00000007540 retrocopies