Parental gene:

ENSSHAG00000013479

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL867623.1:1243675..1245214(-)


>ENSSHAG00000013479
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCGCACTGGGGGCGGGGAAAGAGGGT
GGAGACTGCGAGAGGAGAACTGGCGCTGACCGTCGAGCTCCGGCCGCTAGTGGGCGCCATCTTGGAAGGGCTTGGGGCGC
TGCCCGCTCACTTCATAGGCTTTTTTTCCCAGGTGAACTTCCCCAGATTCCGTAGGAGCTACTGCAAAAGGTGCGGCCGG
CACCAGCTTCACCGGGTGACGCAGTACAGGAGAGGCAAAGATTCCCGGGTCTCGCAGGGGACCAGGCGATACCTTCGGAA
GCAGAAGGGCTATGGTGGGCAAAAGAAACCAGTTTTCCGGAAAAAAGCGAAGACCACAAAAAAGGTTGTAGTGAGACTTG
AATGCACGGTACCCGACTGCAAATGCAAGAGCTTCCTGGCCATTAAAAGGTGTAAGCATTTTGAAGTGGGAGGAGTTAAG
AAGATAAAGGGCCAAATGATCCAGTTCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009384 possible_ortholog 1 retrogene
retro_amel_85,
Bos taurus ENSBTAG00000019253 possible_ortholog 3 retrogenes
retro_btau_183, retro_btau_241, retro_btau_92,
Canis familiaris ENSCAFG00000017688 possible_ortholog 1 retrogene
retro_cfam_154,
Callithrix jacchus ENSCJAG00000004864 possible_ortholog 4 retrogenes
retro_cjac_304, retro_cjac_353, retro_cjac_55, retro_cjac_72,
Felis catus ENSFCAG00000015397 possible_ortholog 3 retrogenes
retro_fcat_106, retro_fcat_25, retro_fcat_80,
Homo sapiens ENSG00000241343 possible_ortholog 14 retrogenes
retro_hsap_1477, retro_hsap_1508, retro_hsap_1595, retro_hsap_1782, retro_hsap_2, retro_hsap_2015, retro_hsap_2274, retro_hsap_2632, retro_hsap_3461, retro_hsap_3819, retro_hsap_3981, retro_hsap_4154, retro_hsap_4299, retro_hsap_647,
Homo sapiens ENSG00000257529 possible_ortholog 1 retrogene
retro_hsap_1353,
Gorilla gorilla ENSGGOG00000009460 possible_ortholog 6 retrogenes
retro_ggor_13, retro_ggor_152, retro_ggor_207, retro_ggor_208, retro_ggor_42, retro_ggor_5,
Loxodonta africana ENSLAFG00000017385 possible_ortholog 1 retrogene
retro_lafr_114,
Macropus eugenii ENSMEUG00000014912 possible_ortholog 6 retrogenes
retro_meug_1056, retro_meug_1381, retro_meug_1610, retro_meug_1979, retro_meug_2185, retro_meug_489,
Monodelphis domestica ENSMODG00000025578 ortholog_one2one 2 retrogenes
retro_mdom_1878, retro_mdom_971,
Mustela putorius furo ENSMPUG00000002168 possible_ortholog 3 retrogenes
retro_mputfur_269, retro_mputfur_530, retro_mputfur_94,
Mus musculus ENSMUSG00000079435 possible_ortholog 1 retrogene
retro_mmus_4,
Nomascus leucogenys ENSNLEG00000007540 possible_ortholog 27 retrogenes
retro_nleu_1003, retro_nleu_1243, retro_nleu_1291, retro_nleu_153, retro_nleu_157, retro_nleu_1632, retro_nleu_178, retro_nleu_1833, retro_nleu_1903, retro_nleu_1959, retro_nleu_2145, retro_nleu_2345, retro_nleu_2381, retro_nleu_2699, retro_nleu_2965, retro_nleu_2995, retro_nleu_2996, retro_nleu_3027, retro_nleu_3028, retro_nleu_3059, retro_nleu_3111, retro_nleu_385, retro_nleu_453, retro_nleu_644, retro_nleu_805, retro_nleu_842, retro_nleu_991,
Otolemur garnettii ENSOGAG00000004551 possible_ortholog 6 retrogenes
retro_ogar_1160, retro_ogar_1681, retro_ogar_2390, retro_ogar_2519, retro_ogar_294, retro_ogar_470,
Pongo abelii ENSPPYG00000025837 possible_ortholog 37 retrogenes
retro_pabe_1141, retro_pabe_1174, retro_pabe_121, retro_pabe_1226, retro_pabe_1256, retro_pabe_1311, retro_pabe_141, retro_pabe_1463, retro_pabe_1539, retro_pabe_154, retro_pabe_1540, retro_pabe_1616, retro_pabe_1650, retro_pabe_1651, retro_pabe_1944, retro_pabe_195, retro_pabe_2011, retro_pabe_2331, retro_pabe_2443, retro_pabe_2622, retro_pabe_2857, retro_pabe_296, retro_pabe_3057, retro_pabe_3151, retro_pabe_3273, retro_pabe_3372, retro_pabe_3687, retro_pabe_3704, retro_pabe_441, retro_pabe_449, retro_pabe_55, retro_pabe_573, retro_pabe_574, retro_pabe_667, retro_pabe_73, retro_pabe_772, retro_pabe_931,
Pteropus vampyrus ENSPVAG00000001569 possible_ortholog 1 retrogene
retro_pvam_17,
Rattus norvegicus ENSRNOG00000011494 possible_ortholog 1 retrogene
retro_rnor_259,
Ictidomys tridecemlineatus ENSSTOG00000027251 possible_ortholog 20 retrogenes
retro_itri_1171, retro_itri_1189, retro_itri_1364, retro_itri_1405, retro_itri_1471, retro_itri_161, retro_itri_1681, retro_itri_290, retro_itri_385, retro_itri_430, retro_itri_555, retro_itri_609, retro_itri_644, retro_itri_730, retro_itri_753, retro_itri_784, retro_itri_803, retro_itri_845, retro_itri_865, retro_itri_903,
Tupaia belangeri ENSTBEG00000015808 possible_ortholog 1 retrogene
retro_tbel_52,
Tursiops truncatus ENSTTRG00000012779 possible_ortholog 1 retrogene
retro_ttru_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_467 70.48 62.13
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Download FASTA sequences of all ENSSHAG00000013479 retrocopies