Parental gene: | EIF4A1, ENSOCUG00000010375 |
| Aliases: | None |
| Description: | Eukaryotic initiation factor 4A-I [Source:UniProtKB/Swiss-Prot;Acc:P29562] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 19:11601527..11606681(-) |
>ENSOCUG00000010375
ATGTCTGCGAGTCAGGATTCCCGATCCAGAGACAATGGCCCCGATGGAATGGAGCCCGAAGGTGTCATCGAGAGTAACTG
GAATGAGATCGTTGACAGCTTTGACGACATGAACCTCTCTGAGTCCCTCCTTCGTGGCATCTATGCCTATGGTTTTGAGA
AGCCCTCTGCCATCCAGCAGCGTGCCATTCTTCCTTGTATCAAGGGTTATGATGTGATCGCTCAAGCCCAATCTGGGACT
GGGAAGACGGCCACATTCGCCATATCGATTCTCCAGCAGATTGAATTGGATCTGAAGGCCACCCAGGCCTTGGTACTAGC
ACCCACTCGGGAATTGGCCCAACAGATACAAAAGGTGGTCATGGCATTAGGAGATTACATGGGTGCGTCCTGTCACGCCT
GCATCGGGGGCACCAATGTGCGTGCTGAGGTGCAGAAGCTGCAGATGGAAGCTCCGCACATCATCGTGGGCACCCCTGGC
CGCGTGTTCGACATGCTTAACCGGAGATACCTGTCTCCCAAGTACATCAAGATGTTTGTACTGGACGAAGCTGATGAAAT
GTTAAGCCGTGGATTCAAGGACCAGATCTATGACATCTTCCAGAAGCTCAACAGCAACACCCAGGTGGTTTTGTTGTCAG
CTACAATGCCTTCCGATGTGCTCGAGGTGACCAAGAAGTTCATGAGGGACCCCATCCGGATTCTTGTCAAGAAGGAGGAG
CTGACGCTGGAGGGTATCCGCCAGTTCTACATCAACGTGGAACGCGAGGAGTGGAAGCTGGACACACTATGTGACTTGTA
CGAAACCCTGACCATAACCCAGGCTGTCATCTTCATCAACACTCGAAGGAAGGTCGATTGGCTCACTGAGAAGATGCACG
CCCGGGACTTCACCGTCTCTGCCATGCACGGAGATATGGACCAAAAGGAGCGAGATGTGATCATGAGGGAGTTCCGCTCT
GGCTCTAGCCGAGTACTGATTACCACTGACCTGCTGGCCAGAGGCATTGATGTACAGCAAGTTTCTTTAGTCATCAACTA
TGACCTTCCCACCAACAGGGAAAACTATATTCACAGAATTGGCCGTGGTGGACGCTTTGGCCGTAAGGGTGTGGCTATTA
ACATGGTGACAGAAGAAGATAAGCGGACTCTCCGAGACATCGAGACCTTCTACAACACCTCCATTGAGGAGATGCCCCTC
AATGTTGCTGACCTCATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 85 .60 RPM |
| SRP017611_kidney | 143 .12 RPM |
| SRP017611_liver | 73 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000000132 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000001107 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010780 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000007090 | ortholog_one2many | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005011 | within_species_paralog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000007926 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_475 | 71.54 | 63.79 | Please wait, loading  |
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| 2. | retro_ocun_934 | 94.82 | 94.83 | Please wait, loading |
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| 3. | retro_ocun_1020 | 81.15 | 93.35 | Please wait, loading |
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| 4. | retro_ocun_1326 | 82.99 | 71.92 | Please wait, loading |
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| 5. | retro_ocun_1375 | 98.75 | 59.11 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000010375 retrocopies