Parental gene: | ATAD1, ENSOCUG00000012082 |
| Aliases: | None |
| Description: | ATPase family, AAA domain containing 1 [Source:HGNC Symbol;Acc:25903] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 18:35639161..35689047(-) |
>ENSOCUG00000012082
TTAACAATCAAGATGGTACATGCTGAAGCCTTTTCTCGTCCCTTGAGTCGGAATGAAGTTGTCGGTTTAATTTTCCGTTT
GACGATATTTGGTGCAGTAACATACTTTACTATCAAATGGATGGTAGATGCAATTGATCCAACAAGAAAGCAAAAAGTAG
AAGCTCAGAAACAGGCAGAAAAATTGATGAAGCAAATTGGTGTGAAAAATGTGAAGCTTTCAGAATACGAAATGAGCATT
GCTGCTCATCTAGTAGACCCTCTTAACATGCATGTTACTTGGAGTGATATAGCAGGTTTAGATGATGTCATTACGGATCT
GAAAGACACAGTGATCTTACCTATCAAAAAGAAGCATTTGTTTGAGAATTCTAGACTTCTACAACCTCCGAAGGGTGTGC
TTCTCTATGGGCCTCCAGGCTGTGGTAAAACATTGATTGCTAAGGCGACAGCCAAAGAAGCAGGCTGCCGATTTATTAAC
CTTCAGCCTTCAACACTGACTGATAAGTGGTATGGAGAATCTCAGAAGTTGGCTGCTGCTGTTTTTTCTCTTGCCATAAA
GCTACAGCCATCCATCATCTTTATAGATGAAATAGACTCCTTTCTAAGAAACCGTTCAAGTTCTGACCATGAAGCTACAG
CCATGATGAAAGCTCAGTTTATGAGTCTGTGGGATGGATTGGATACTGATCACAGCTGCCAGGTCATAGTGATGGGAGCT
ACTAATCGCCCTCAGGATCTTGACTCGGCTATAATGAGAAGAATGCCTACAAGATTTCATATCAACCAGCCTGCTCTAAA
ACAAAGAGAAGCAATTTTGAAGCTTATCTTGAAAAATGAAAATGTGGATAGGCATGTAGACCTGTTAGAAGTTGCCCAGG
AAACTGATGGTTTTTCAGGAAGTGACCTAAAAGAGATGTGTAGGGATGCTGCCCTCCTCTGTGTCAGGGAATATGTTAAT
TCCACATCAGAAGAAAGCCATGATGAAGATGAAATTCGGCCTGTGCAGCAGCAGGACCTACATCGGGCAATTGAAAAGAT
GAAGAAATCAAAGGATGCAGCATTTCAGAATGTTTTAACACATGTTTGTTTAGATTAA
TTAACAATCAAGATGGTACATGCTGAAGCCTTTTCTCGTCCCTTGAGTCGGAATGAAGTTGTCGGTTTAATTTTCCGTTT
GACGATATTTGGTGCAGTAACATACTTTACTATCAAATGGATGGTAGATGCAATTGATCCAACAAGAAAGCAAAAAGTAG
AAGCTCAGAAACAGGCAGAAAAATTGATGAAGCAAATTGGTGTGAAAAATGTGAAGCTTTCAGAATACGAAATGAGCATT
GCTGCTCATCTAGTAGACCCTCTTAACATGCATGTTACTTGGAGTGATATAGCAGGTTTAGATGATGTCATTACGGATCT
GAAAGACACAGTGATCTTACCTATCAAAAAGAAGCATTTGTTTGAGAATTCTAGACTTCTACAACCTCCGAAGGGTGTGC
TTCTCTATGGGCCTCCAGGCTGTGGTAAAACATTGATTGCTAAGGCGACAGCCAAAGAAGCAGGCTGCCGATTTATTAAC
CTTCAGCCTTCAACACTGACTGATAAGTGGTATGGAGAATCTCAGAAGTTGGCTGCTGCTGTTTTTTCTCTTGCCATAAA
GCTACAGCCATCCATCATCTTTATAGATGAAATAGACTCCTTTCTAAGAAACCGTTCAAGTTCTGACCATGAAGCTACAG
CCATGATGAAAGCTCAGTTTATGAGTCTGTGGGATGGATTGGATACTGATCACAGCTGCCAGGTCATAGTGATGGGAGCT
ACTAATCGCCCTCAGGATCTTGACTCGGCTATAATGAGAAGAATGCCTACAAGATTTCATATCAACCAGCCTGCTCTAAA
ACAAAGAGAAGCAATTTTGAAGCTTATCTTGAAAAATGAAAATGTGGATAGGCATGTAGACCTGTTAGAAGTTGCCCAGG
AAACTGATGGTTTTTCAGGAAGTGACCTAAAAGAGATGTGTAGGGATGCTGCCCTCCTCTGTGTCAGGGAATATGTTAAT
TCCACATCAGAAGAAAGCCATGATGAAGATGAAATTCGGCCTGTGCAGCAGCAGGACCTACATCGGGCAATTGAAAAGAT
GAAGAAATCAAAGGATGCAGCATTTCAGAATGTTTTAACACATGTTTGTTTAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 4 .24 RPM |
| SRP017611_kidney | 9 .73 RPM |
| SRP017611_brain | 14 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005296 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000138138 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026651 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006414 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012135 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002717 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000014020 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000010861 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006563 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1634 | 99.45 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000012082 retrocopies