Parental gene:

ATAD1, ENSPTRG00000002717

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:10:87250137..87316570(-)


>ENSPTRG00000002717
ATGGTACATGCTGAAGCCTTTTCTCGTCCTTTGAGTCGGAATGAAGTTGTTGGTTTAATTTTCCGTTTGACAATATTTGG
TGCAGTGACATACTTTACTATCAAATGGATGGTAGATGCAATTGATCCAACCAGAAAGCAAAAAGTAGAAGCTCAGAAAC
AGGCAGAAAAACTAATGAAGCAAATTGGAGTGAAAAATGTGAAGCTCTCAGAATATGAAATGAGTATTGCTGCTCATCTT
GTAGACCCTCTTAATATGCATGTTACTTGGAGTGATATAGCAGGTTTAGATGATGTCATTACGGATCTGAAAGACACAGT
CATCTTACCTATCAAAAAGAAACATTTGTTTGAGAATTCCAGGCTTCTGCAGCCTCCAAAAGGTGTTCTTCTCTATGGGC
CTCCAGGCTGTGGTAAAACGTTGATTGCCAAGGCCACAGCCAAAGAAGCAGGCTGTCGATTTATTAACCTTCAGCCTTCG
ACACTGACCGATAAGTGGTATGGAGAATCTCAGAAATTGGCTGCTGCTGTCTTCTCCCTTGCCATAAAGCTACAACCATC
CATCATCTTTATAGATGAAATAGACTCCTTTCTACGAAACCGTTCAAGTTCTGACCATGAAGCTACAGCCATGATGAAAG
CTCAGTTTATGAGTCTCTGGGATGGATTGGATACTGATCACAGCTGCCAGGTCATAGTAATGGGAGCTACCAATCGTCCT
CAGGACCTTGACTCGGCTATAATGAGAAGAATGCCTACAAGATTTCATATCAACCAGCCTGCTTTAAAACAGAGAGAAGC
AATCCTGAAACTCATCTTGAAAAATGAAAATGTGGATAGGCATGTAGACCTGCTAGAAGTTGCCCAGGAAACTGATGGGT
TTTCAGGAAGTGACCTAAAAGAGATGTGTCGAGATGCTGCCCTCCTCTGTGTTAGAGAATATGTTAATTCTACATCAGAA
GAAAGCCATGACGAAGATGAAATTCGGCCTGTTCAACAGCAGGACCTGCATCGGGCAATTGAAAAGATGAAGAAATCAAA
GGATGCAGCATTTCAGAATGTTTTAACACATGTTTGTTTAGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 31 .53 RPM
SRP007412_cerebellum 37 .21 RPM
SRP007412_heart 91 .31 RPM
SRP007412_kidney 34 .02 RPM
SRP007412_liver 20 .46 RPM
SRP007412_testis 124 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005296 ortholog_one2one 1 retrogene
retro_cjac_1101,
Homo sapiens ENSG00000138138 ortholog_one2one 1 retrogene
retro_hsap_1900,
Gorilla gorilla ENSGGOG00000026651 ortholog_one2one 1 retrogene
retro_ggor_1393,
Macaca mulatta ENSMMUG00000006414 ortholog_one2many 1 retrogene
retro_mmul_608,
Nomascus leucogenys ENSNLEG00000012135 ortholog_one2one 1 retrogene
retro_nleu_1231,
Oryctolagus cuniculus ENSOCUG00000012082 ortholog_one2one 1 retrogene
retro_ocun_1634,
Pteropus vampyrus ENSPVAG00000014020 ortholog_one2one 1 retrogene
retro_pvam_1080,
Rattus norvegicus ENSRNOG00000010861 ortholog_one2one 1 retrogene
retro_rnor_2752,
Ictidomys tridecemlineatus ENSSTOG00000006563 ortholog_one2one 1 retrogene
retro_itri_309,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1255 79.92 64.82
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Download FASTA sequences of all ENSPTRG00000002717 retrocopies