Parental gene:

NAP1L1, ENSOCUG00000013857

Aliases:None
Description:nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:4:54994548..55014994(-)


>ENSOCUG00000013857
ATGGCAGACATTGACAACAAAGAACAGTCTGAACTTGATCAAGATTTGGATGATGTTGAAGAAGTAGAAGAAGAAGAAAC
TGGTGAAGAAACAAAAATCAAAGCGCGTCAACTGACTGTTCAGATGATGCAAAATCCTCAGATTCTTGCAGCCCTTCAAG
AAAGACTTGATGGTTTGGTAGAAACACCAACAGGATACATTGAAAGCTTGCCTAGGGTAGTTAAAAGACGAGTGAATGCT
CTCAAAAACCTGCAAGTTAAATGTGCACAGATAGAAGCCAAATTCTATGAGGAAGTTCATGATCTTGAAAGGAAGTATGC
TGTTCTCTATCAGCCTCTATTTGATAAGCGATTTGAGATTATAAATGCAATTTATGAACCTACGGAAGAAGAATGTGAAT
GGAAACCAGATGAGGAAGATGAAATTTCAGAGGAGTTGAAAGAAAAAGCCAAGATTGAAGATGAGAAAAAAGATGAAGAA
AAAGAAGACCCCAAAGGAATTCCTGAATTTTGGTTGACTGTTTTTAAGAATGTTGACTTGCTCAGTGATATGGTGCAGGA
ACATGATGAACCTATTCTAAAGCACTTGAAAGATATTAAAGTGAAGTTCTCTGATGCTGGCCAGCCTATGAGTTTTGTCT
TAGAATTTCACTTTGAACCCAATGAATATTTCACAAATGAAGTGCTAACAAAGACATATAGGATGAGATCAGAACCAGAT
GATTCCGATCCCTTTTCATTTGACGGACCAGAAATTATGGGTTGTACGGGGTGCCAGATAGATTGGAAAAAAGGAAAGAA
TGTCACTTTGAAAACCATTAAGAAGAAGCAGAAACACAAGGGACGTGGGACAGTTCGTACTGTGACTAAAACAGTTTCCA
ATGACTCTTTCTTTAATTTTTTTGCCCCTCCTGAAGTTCCTGAGAGCGGAGATTTGGATGATGATGCTGAAGCTATCCTT
GCTGCAGACTTTGAAATTGGTCACTTTTTACGTGAACGTATAATCCCAAGATCAGTGTTATACTTTACTGGAGAAGCTAT
TGAAGATGATGACGATGATTATGATGAAGAAGGTGAAGAAGCGGATGAGGAAGGGGAAGAAGAAGGAGATGAGGAAAATG
ATCCAGACTATGACCCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAGCAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 135 .16 RPM
SRP017611_kidney 66 .08 RPM
SRP017611_liver 36 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020908 possible_ortholog 8 retrogenes
retro_btau_1319, retro_btau_1324, retro_btau_1462, retro_btau_1487, retro_btau_474, retro_btau_652, retro_btau_70, retro_btau_935,
Macropus eugenii ENSMEUG00000013702 ortholog_one2one 2 retrogenes
retro_meug_1031, retro_meug_604,
Macaca mulatta ENSMMUG00000015583 possible_ortholog 1 retrogene
retro_mmul_233,
Monodelphis domestica ENSMODG00000020456 ortholog_one2many 4 retrogenes
retro_mdom_1476, retro_mdom_1638, retro_mdom_520, retro_mdom_724,
Mustela putorius furo ENSMPUG00000017474 possible_ortholog 1 retrogene
retro_mputfur_505,
Mus musculus ENSMUSG00000058799 possible_ortholog 1 retrogene
retro_mmus_263,
Oryctolagus cuniculus ENSOCUG00000005624 within_species_paralog 1 retrogene
retro_ocun_384,
Rattus norvegicus ENSRNOG00000003890 possible_ortholog 1 retrogene
retro_rnor_150,
Tursiops truncatus ENSTTRG00000017062 ortholog_one2one 2 retrogenes
retro_ttru_160, retro_ttru_1921,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_834 73.39 54.99
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Download FASTA sequences of all ENSOCUG00000013857 retrocopies