Parental gene:

CCDC43, ENSOCUG00000017526

Aliases:None
Description:coiled-coil domain containing 43 [Source:HGNC Symbol;Acc:26472]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:45608544..45623846(+)


>ENSOCUG00000017526
ATGCGCAGTGCGCCCGCGGCGCGGCCCGTCAGGCACTGCGGTAGGCGTCCCGGGGGCTGGCAGGACCCTGACCCCAAGAT
GGCGGCGCCCAGCGGAGTCGGCGCGGCAGCCTCCCGAAAAGACGATGGCGGAGGCGGGGGCGGCGGCTTTGGATCGTGGC
TAGACGGACGGTTGGAGGCTCTGGGAGTGGACCAGGCCGTGTATGGCGCCTACATCCTTGGTGTCTTGCAGGAGGAGGAG
GAGGAGGAGAAGCTTGACGCTCTGCAGGGGATCCTGTCTGCTTTCCTGGAAGAAGATTCTCTTCTTGATGTCTGCAAGGA
AATTGTGGAACGATGGTCGGAGTCTCAAAGCGTTGTCAGCAAAGTGGAAAAAGAAGATGAGGTCCAGGCCATTGCCACCC
TAATCGAGAAGCAGGCGCAGATCGTGGTGAAGCCCAGGATGGTGTCGGAAGAGGCCAAGCAGAGGAAAGCTGCCCTCCTG
GCGCAGTACGCCGACGTGACCGACGAGGAGACTGATGCCGATGAGAAGGAGGACTCCGGTGCTACCTCGGTGAACATCGG
TTCTGACAGATCGCTGTTCCGCAACACCAACGTGGAAGACGTCCTCAACGCCCGCCGCCTGGAGCGAGACTCGCTGCGGG
ATGAGTCCCAGAGGAAGAAGGAACAGGACAGGCTGCAGAGGGAGAGGGACAAACTGGCCAAGCAGGAGCGCAAGGAGAAA
GAGAAGAAGCGCACACAGAGAGGAGAGCGGAAGCGATAG

Library Parental gene expression (RPM)
SRP017611_brain 7 .56 RPM
SRP017611_kidney 6 .08 RPM
SRP017611_liver 2 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018379 ortholog_one2one 1 retrogene
retro_amel_1479,
Canis familiaris ENSCAFG00000014115 ortholog_one2one 1 retrogene
retro_cfam_456,
Monodelphis domestica ENSMODG00000011411 ortholog_one2one 1 retrogene
retro_mdom_1378,
Mustela putorius furo ENSMPUG00000009224 ortholog_one2one 1 retrogene
retro_mputfur_1511,
Ochotona princeps ENSOPRG00000006793 ortholog_one2one 2 retrogenes
retro_opri_263, retro_opri_699,
Rattus norvegicus ENSRNOG00000002748 ortholog_one2one 1 retrogene
retro_rnor_2906,
Sus scrofa ENSSSCG00000017352 ortholog_one2many 2 retrogenes
retro_sscr_173, retro_sscr_944,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1500 57.86 55.16
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Download FASTA sequences of all ENSOCUG00000017526 retrocopies