Parental gene: | APOO, ENSOGAG00000001960 |
| Aliases: | None |
| Description: | apolipoprotein O [Source:HGNC Symbol;Acc:28727] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873570.1:9256041..9292331(-) |
>ENSOGAG00000001960
GTGTTTCAGGTACTTCAGAGGTCCGTGGGGCCGGCCAGCCTGAGCTTGCTCGCCTTCAAAGTCTATGCAGCTCCGAGAAA
GGACTCACCCCCCACAAATCCAATGAAGGTTAATGAGCTTTCACTCTACTCAGTTCCCGAGGGTCAATCCAAATATGTAG
AGGAGCCACGGACCCAACTTGAAGAAACCATCTCACAGCTGCGAAATCACTGCGAGCCATATACAAGTTGGTGTCAGGAA
ACATACTCCCAAACTAAGCCCAAGATGCAAAGTTTGGTTCAATTGGGGTTAGACAGCTATGAATATCTCCAACATGCCCC
TCCTGGGTTTTTCCCAAGACTTGGTGTTATTGGTTTCGCTGGCCTTGTTGGACTCCTTTTGGCTAGAGGTTCAAAAGTAA
AGAAGCTGGTGTATCCACCTGGTTTCATGGGATTAGCTGCCTCTATCTATTATCCACAACAAGCCATTGCATTTGTCCAG
GTCGGTGGGGAGAAATTATATGACTGGGGTTTGCGAGGATACATAGTTGTAGAAGATTTGTGGAAGAGGAACTTTCAAAA
GCCAGGAAGTGTGAAGAATTCACCTGGAAATAAG
GTGTTTCAGGTACTTCAGAGGTCCGTGGGGCCGGCCAGCCTGAGCTTGCTCGCCTTCAAAGTCTATGCAGCTCCGAGAAA
GGACTCACCCCCCACAAATCCAATGAAGGTTAATGAGCTTTCACTCTACTCAGTTCCCGAGGGTCAATCCAAATATGTAG
AGGAGCCACGGACCCAACTTGAAGAAACCATCTCACAGCTGCGAAATCACTGCGAGCCATATACAAGTTGGTGTCAGGAA
ACATACTCCCAAACTAAGCCCAAGATGCAAAGTTTGGTTCAATTGGGGTTAGACAGCTATGAATATCTCCAACATGCCCC
TCCTGGGTTTTTCCCAAGACTTGGTGTTATTGGTTTCGCTGGCCTTGTTGGACTCCTTTTGGCTAGAGGTTCAAAAGTAA
AGAAGCTGGTGTATCCACCTGGTTTCATGGGATTAGCTGCCTCTATCTATTATCCACAACAAGCCATTGCATTTGTCCAG
GTCGGTGGGGAGAAATTATATGACTGGGGTTTGCGAGGATACATAGTTGTAGAAGATTTGTGGAAGAGGAACTTTCAAAA
GCCAGGAAGTGTGAAGAATTCACCTGGAAATAAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012749 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000226 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004909 | possible_ortholog | 8 retrogenes | |
| Cavia porcellus | ENSCPOG00000004197 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006710 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000013441 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000014150 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000000029 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000029070 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014222 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016361 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000025554 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000109 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000079508 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002530 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000046918 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000008734 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012174 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014888 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_1083 | 77.78 | 68.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_1104 | 83.33 | 63.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_2092 | 80.77 | 64.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_2466 | 68.50 | 63.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ogar_2927 | 63.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ogar_3094 | 77.04 | 98.99 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000001960 retrocopies