Parental gene:

GPBP1L1, ENSOPRG00000001584

Aliases:None
Description:GC-rich promoter binding protein 1-like 1 [Source:HGNC Symbol;Acc:28843]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_1449:158964..221317(-)


>ENSOPRG00000001584
TCACCTACAGCCACCTTTGAAAAACACAGAGAACATCTTCCCCGAGGAGAAGGTAGATTTGGAGTAAGCCGTCGTCGACA
CAATTCCTCTGATGGCTTTTTTAACAATGGACCCTTACGGACTACATCCTGGCACCAGCCCTCCCTGTTCCGCCATGATT
CTGTGGACTCTGGTGTCTCTAAAGGCGCGTATGCTGGAATCACCGGCCACCTCTCTGGTTGGCATGGCTCATCGCGAGGT
CATCACGATGGTGTGAGCCAGCGCAGTGCAGGTGCACCTGGGAACCATCGACACTGGAATGGCAGCCTGTACACCCGGAA
AGGCTGTGCCTTTCAAGAAAAGCCTCCAACAGAGATTAGGGAAGAAAAGAAAGAAGACAAGGTGGAAAGATTACAGTTTG
AAGAGGAAGATTTTCCTTCTTTGAATCCAGAAGCTGGCAAACAGAATCAGCCATGCAGACCTATTGGGACCCTTTCTGGA
GTGTGGGAAAACCCACCTAGTGCCAAGCAATCTTCTAAGATGTTAGTCATCAAAAAAGTTTCCAAAGAGGATCCTGCTGC
TGCTTTCTCTGCTGCATTCACCTCTGCAGGATCTCACCATGCAAATGGGAACAAAGCATCAACCATGGTTCCAAGTGTCT
ATAAGAACTTGGTTCCTAAGCCTGCGCCACCTCCTTCAAAGCCCAATGCATGGAAATCTAACAGAATGGAACACAAGTCG
GGCTCCCTTTCCTCTAACCGGGAGTCTGCTTTCACCAGTCCTGTCTCTGTTACTAAGCCAGTGGTACTGGCTGGTGCTGC
ACTTCTAAACTCTCCCAAAGAGAGTCCCTCCAGCACCACTCCTCCAATTGAGATCAGCTCCTCTCGTCTGACCAAGTTGA
CCCGCCGAACCACTGACAGGAAGAGTGAGTTCCTGAAGACTCTAAAGGATGACCGGAATGGAGACTGTGACAAACCTGAG
GGTTCGGAGGACAACAGCACACCTGAACCAAAGGAAAATGGAGAAGGCTGTCATCAGAATGGTCTTTCTCTCCCTGTGGT
AGAAGAAGGGGAAGTCCTCTCACACTCTCTGGAAGCAGAGCACAGGTTATTGAAAGCAATGGGATGGCAGGAATATCCTG
AAAATGATGAGAATTGCCTTCCTCTAACGGAAGATGAACTCAAAGAGTTCCACATGAAGACAGAGCAGTTAAGAAGAAAT
GGCTTTAGGAAAAATGGTTTCCTGCGGAATCGCAGTTCCTGCCTCTTCTCCCCTTGGAGGAGCACCGGTAAAGCAGAGGC
GGAGGACTCCGACACAGAGACCAGTAGCAGCGAAACATCAGATGACGATGCCTGGAAGTAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010454 possible_ortholog 1 retrogene
Microcebus murinus ENSMICG00000008449 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000012432 possible_ortholog 2 retrogenes
Mus musculus ENSMUSG00000034042 ortholog_one2one 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000017939 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000004134 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000037595 ortholog_one2many 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000013491 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_928 85.27 50.22
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSOPRG00000001584 retrocopies