Parental gene:

ENSOPRG00000002097

Aliases:None
Description:None
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_5381:38447..46350(+)


>ENSOPRG00000002097
ATGAGTCACCGGCCAGGCACCCCTACTGTCCTCCGCAGCCAGTCAAGGAGTCAGCTCCTTAGGGACTGTAGGGTCTATGT
CAATCTACTGGAAATGCTACTGGAATTACAGCAGTCTGTGCAGGATCACTTCACGCACCTGAGAACCTTGCAGGAGGAAC
AGAGTCATACTGGAGCCATCTGTGAGCATGAAGACCAGCTGAACGACCTGATACGCGTGATGATCAACCTCATGTGGTCC
GAGGCTGTGAGTGGCCTGGGGTTACAGGAGACTCTCCCAGTCCTGAATTCCAGGGCTGCTGTTGGGGGTATACAGAGGGT
GAACTTGTCCTCTCAACCCTACCGGCCGACTCCCCAACAGAGTGAATCTGGAGCTACGCTTGTCAGCCAGGACCTCTCCA
GCCGTGGAATTGATATCGCTGCCTCTTTCCAGTCGGGATTCCAGGACTACCAGGCCTACCAAAGAGACAAATACCACAAG
GACAAGAACAGCATGGGCTTCATTAACCTTGGCACCAGTGAGAACAAACTCTGTATCGATCTGATGACTGAGAGGTTGTG
CCAGAGTGACATGAACCACATCGAGGAGGTCCTGCTGCAATATCCTGATTGGAGAGGGCATCCATTCCTGCGGGAAGAAG
TGGCTCGGTTCCTGACCTACTACTGCAAAGCACCTGCCAGCCTTAATCCAGACAATGTGGTTATTCTTAATGGCTGCTGC
TCTGTCTTCTCTGCATTAGCCATGGTTCTGTGTGACCCAGGGGATGCTTTTCTCATCCCCACTCCCTTCTATGGTGGCTT
CATCTTCAGCTCCTACTTGTATGCCAAAGTTGAACTGATTGGCGTCCACCTAGAGAGTGAGATCACCGAGGAGAACACCA
GTCCTTTCCAGCTCACTGTGAAAAAGCTGGAGCAAGCCATGGCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCTTGCCTGACCCCAACAGGACCCACGTGATCTGGGGAACTAGTAAGGATTTTGGCATCTCTGGCTTCCGCTTTGGT
GCTCTGTACACCCACAACAAGGATGTGGCCTCTGCCGTGTGCTCCTTTGGCTACCTCCACAGTACCTCTGGCACCGCCCA
GTACAAACTACACCGCCTGCTCCAAGACACA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011384 ortholog_many2many 1 retrogene
retro_cjac_100,
Dipodomys ordii ENSDORG00000005058 ortholog_one2many 1 retrogene
retro_dord_340,
Equus caballus ENSECAG00000011908 ortholog_one2many 1 retrogene
retro_ecab_575,
Echinops telfairi ENSETEG00000009026 ortholog_one2many 2 retrogenes
retro_etel_1006, retro_etel_204,
Homo sapiens ENSG00000205126 ortholog_one2many 1 retrogene
retro_hsap_3553,
Myotis lucifugus ENSMLUG00000005151 ortholog_one2many 1 retrogene
retro_mluc_1235,
Nomascus leucogenys ENSNLEG00000017966 ortholog_one2many 1 retrogene
retro_nleu_2326,
Ochotona princeps ENSOPRG00000006805 within_species_paralog 7 retrogenes
retro_opri_1064, retro_opri_1151, retro_opri_251, retro_opri_252, retro_opri_398, retro_opri_399, retro_opri_808,
Pongo abelii ENSPPYG00000003340 ortholog_one2many 1 retrogene
retro_pabe_2934,
Pan troglodytes ENSPTRG00000028662 ortholog_one2many 1 retrogene
retro_ptro_2414,
Tupaia belangeri ENSTBEG00000016623 ortholog_one2many 1 retrogene
retro_tbel_3677,
Tursiops truncatus ENSTTRG00000002727 ortholog_one2many 1 retrogene
retro_ttru_1321,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_526 93.28 54.46
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Download FASTA sequences of all ENSOPRG00000002097 retrocopies