Parental gene: | ENSOPRG00000006805 |
| Aliases: | None |
| Description: | None |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_2896:471324..481210(+) |
>ENSOPRG00000006805
CTGCGGGAAGAAGTGGCTCGGTTCCTGACCTACTACTGCAAAGCACCTGCCAGCCTTAATCCAGACAATGTGGTTATTCT
TAATGGCTGCTGCTCTGTCTTCTCTGCATTAGCCATGGTTCTGTGTGACCCAGGGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCCC
TTCCAGCTGAAAAAAAACTGGGAGCAAGCCATGGGTGAAGCTAGATTCTGGGGGAAAAGAGTCAAAGGCCTCGTGCTAGT
CAACCCACAGAATCCTCTGGGTGGCATCTACTCCCAAGAGTCACTGAAGGAATACCTGGAATTTGCCAAGAGGAATTACT
TGCATGTGATCATGGATGAAATTTACATGCTCACTGTGTTTGATGACTCTCTCAAGTTCCACAGCGTGCTGAGCATAAAA
AGCTTGCCTGACCCCAACAGGACCCACGTGATCTGGGGAACTAGTAAGGATTTTGGCATCTCTGGCTTCCGCTTTGGTGC
TCTGTACACCCACAACAAGGATGTGGCCTCTGCCGTGTGCTCCTTTGGCTACCTCCACAGTACCTCTGGCACCGCCCAGT
ACAAACTACACCGCCTGCTCCAAGACACAGAATGGATCAACACAGTGTACCTGCCGACCAACCTCTCACGGCTCAGGAAG
GCCTACAATTATGTCACTGGTCAGCTGAAGCTATTGGGAATCCCGTTTCTCAGTGGTGGCGCTGGTCTCTACATCTGGAT
CAACTTGAAGTCGTACCTAGAACCATGTACATTTGATGAAGAACTGGCCCTCCATCAGCACTTTCTGGACATGAAGGTGA
TGTTATCCCGTGGCAAAAGCTTCAAGTGTAAAGAGCCTGGCTGGTTCCGCCTCATGTTTGCAGAAAAGCTTCCAACACTG
GAAGTGGCCATGCAACGGTTGCACAACGCGTTACAGATTCAGAAACAGATTCAGGAACAGAAACAGATAGAGAAGATGCT
GGCGGAT
CTGCGGGAAGAAGTGGCTCGGTTCCTGACCTACTACTGCAAAGCACCTGCCAGCCTTAATCCAGACAATGTGGTTATTCT
TAATGGCTGCTGCTCTGTCTTCTCTGCATTAGCCATGGTTCTGTGTGACCCAGGGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCCC
TTCCAGCTGAAAAAAAACTGGGAGCAAGCCATGGGTGAAGCTAGATTCTGGGGGAAAAGAGTCAAAGGCCTCGTGCTAGT
CAACCCACAGAATCCTCTGGGTGGCATCTACTCCCAAGAGTCACTGAAGGAATACCTGGAATTTGCCAAGAGGAATTACT
TGCATGTGATCATGGATGAAATTTACATGCTCACTGTGTTTGATGACTCTCTCAAGTTCCACAGCGTGCTGAGCATAAAA
AGCTTGCCTGACCCCAACAGGACCCACGTGATCTGGGGAACTAGTAAGGATTTTGGCATCTCTGGCTTCCGCTTTGGTGC
TCTGTACACCCACAACAAGGATGTGGCCTCTGCCGTGTGCTCCTTTGGCTACCTCCACAGTACCTCTGGCACCGCCCAGT
ACAAACTACACCGCCTGCTCCAAGACACAGAATGGATCAACACAGTGTACCTGCCGACCAACCTCTCACGGCTCAGGAAG
GCCTACAATTATGTCACTGGTCAGCTGAAGCTATTGGGAATCCCGTTTCTCAGTGGTGGCGCTGGTCTCTACATCTGGAT
CAACTTGAAGTCGTACCTAGAACCATGTACATTTGATGAAGAACTGGCCCTCCATCAGCACTTTCTGGACATGAAGGTGA
TGTTATCCCGTGGCAAAAGCTTCAAGTGTAAAGAGCCTGGCTGGTTCCGCCTCATGTTTGCAGAAAAGCTTCCAACACTG
GAAGTGGCCATGCAACGGTTGCACAACGCGTTACAGATTCAGAAACAGATTCAGGAACAGAAACAGATAGAGAAGATGCT
GGCGGAT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011384 | ortholog_many2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000005058 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000011908 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009026 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000205126 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005151 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017966 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000002097 | within_species_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003340 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000028662 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016623 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000002727 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_251 | 91.75 | 55.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_252 | 94.10 | 77.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_398 | 91.75 | 55.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_399 | 94.10 | 77.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_opri_808 | 95.63 | 71.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_opri_1064 | 88.97 | 77.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_opri_1151 | 95.63 | 71.92 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000006805 retrocopies