Parental gene: | COX4I1, ENSOPRG00000002129 |
| Aliases: | None |
| Description: | cytochrome c oxidase subunit IV isoform 1 [Source:HGNC Symbol;Acc:2265] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_1979:32674..33922(+) |
>ENSOPRG00000002129
AGCGTTGTGAAGAGTGAGGACTATGCCCTGCCGAGCTATGTGGACCGGCGGGACTACCCGCTGCCTGACGTGGCGCACGT
GAAGCAGCTGTCCGCCGGCCAGAAGGCGCTGAAGGAGAAGGAGAAGGCCCCCTGGGGCAGCCTCACCAGGGACGAGAAGG
TCGAACTGTATCGCATCCAGTTCAACGAGAGCTTCGCTGAGATGAACAGAGGCACCAGCGAGTGGAAGACAGTGGTGGGC
GCGGCCTTGTTCTTCATCGGCTTCACCGCCCTCGTCCTCATCTGGGAGAAGCACTATGTGTACGGCCCCATCCCGCACAC
CTTTGACAAGGATTGGGTGGCCATGCAGACCAAGAGGATGCTGGACATGAAGGTCGGCCCCATCCACGGCTTCTCTGCCA
AGTGGGACTACGACAAGAACGAGTGGAAGAAGTAG
AGCGTTGTGAAGAGTGAGGACTATGCCCTGCCGAGCTATGTGGACCGGCGGGACTACCCGCTGCCTGACGTGGCGCACGT
GAAGCAGCTGTCCGCCGGCCAGAAGGCGCTGAAGGAGAAGGAGAAGGCCCCCTGGGGCAGCCTCACCAGGGACGAGAAGG
TCGAACTGTATCGCATCCAGTTCAACGAGAGCTTCGCTGAGATGAACAGAGGCACCAGCGAGTGGAAGACAGTGGTGGGC
GCGGCCTTGTTCTTCATCGGCTTCACCGCCCTCGTCCTCATCTGGGAGAAGCACTATGTGTACGGCCCCATCCCGCACAC
CTTTGACAAGGATTGGGTGGCCATGCAGACCAAGAGGATGCTGGACATGAAGGTCGGCCCCATCCACGGCTTCTCTGCCA
AGTGGGACTACGACAAGAACGAGTGGAAGAAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000005479 | ortholog_one2one | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000018274 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000016079 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000019921 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000017319 | ortholog_one2one | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000017207 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000011722 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000007612 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000131143 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010047 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000014002 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006763 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000031818 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011409 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001735 | ortholog_one2one | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000007619 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000008434 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000017817 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009682 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_267 | 66.67 | 90.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_821 | 56.74 | 96.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_857 | 52.25 | 76.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_1205 | 66.67 | 90.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000002129 retrocopies