Parental gene:

BLOC1S6, ENSOPRG00000007310

Aliases:None
Description:biogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:HGNC Symbol;Acc:8549]
Organism:Southern American pika (Ochotona princeps)
Coordinates:scaffold_11958:4581..20690(+)


>ENSOPRG00000007310
ATGAGCGTCCCCGGGCCGCAGTCCCCCGACGGGGGCCTGACGGGGCCGCCCGGCAGCCTGGAGGTCAGGGAATTGATGCC
GGGTTTGAGTGATGCTTCTCCAGATGAAGGGTTAATAGAGGACCTGAGTGTAGAAGACAGAGCTGTGGAGCAGCTGGCCG
AAGGATTGCTTTCCCACTACTTGCCAGATCTGCAGAGATCAAAACAAGCCCTCCAGGAACTCACACAAAACCAAGTTGTC
TTATTAGACACCCTGGAACAAGAGATTTCAAAATTTAAAGAATGCCATTCTATGTTGGACATTAATGCTTTGTTCACTGA
GGCCAAACATTACCATGCCAAGTTGGTGAACATAAGGAAAGAGATGCTGATGCTTCATGAGAAGACATCAAAGTTAAAAA
AACGAGCACTGAAACTACAGCAGAAGAGGCAAAAAGAAGAGTTGGAAAGGGAGCAGCAGCGGGAGAAGGAATTTGAAAGA
GAAAAGCAGTTAACTGCCAAACCAGCTAAAAGGACA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012059 ortholog_one2one 7 retrogenes
retro_chof_1342, retro_chof_20, retro_chof_2054, retro_chof_2102, retro_chof_211, retro_chof_248, retro_chof_600,
Dasypus novemcinctus ENSDNOG00000019785 ortholog_one2one 5 retrogenes
retro_dnov_1687, retro_dnov_1885, retro_dnov_2009, retro_dnov_2411, retro_dnov_275,
Echinops telfairi ENSETEG00000007378 ortholog_one2one 1 retrogene
retro_etel_404,
Macropus eugenii ENSMEUG00000012636 ortholog_one2one 1 retrogene
retro_meug_778,
Monodelphis domestica ENSMODG00000017628 ortholog_one2one 2 retrogenes
retro_mdom_1673, retro_mdom_561,
Otolemur garnettii ENSOGAG00000013706 possible_ortholog 1 retrogene
retro_ogar_206,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_574 78.69 70.93
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Download FASTA sequences of all ENSOPRG00000007310 retrocopies