Parental gene: | H1FOO, ENSOPRG00000010371 |
| Aliases: | None |
| Description: | H1 histone family, member O, oocyte-specific [Source:HGNC Symbol;Acc:18463] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_6775:7113..12964(+) |
>ENSOPRG00000010371
ATGGAGCCCAACGCCATCCCCAGCGGCGACTCCTCCGCCCCCTTGGCCCCCGCGGCCAAGCTGCCAGACCCTACCGAGCC
AGGCAGCCTCACGCAGAGCCGCAAACCCACGATGCTGCGCATGGTGCTAGAGGCGCTGCAGGCGAGCGAACGGCGCCAAG
GCACGTCAGTGATGGCCATCAAGCTCTACATCCTGCGCAAGTATCCGACTGTGCACAGCCTGCGCTTCAAGTACCTGCTC
AAGCAGGCCCTGGCCACCGGCATGAGTCGAGGCCTCCTCACCAGGCCCCTCCACTCCAAGGCCAAGGGCGCCACTGGCAG
CTTCAAATTGGTGTCCGAGCGCAAGAACACAACTCAGCCCAGGAAGGCCAGGAAGGGGAAGGCCGGAAAAGCGGGGAAGG
CCAAGGAGCCAGTCTCCAAGAAACCTAGAGAGGCCGACGGCCAGGTGGGACAGGCACACAAGAAGCCGGGTGCCGTGGGG
AAGGTGCCTCCTAAGCCAGGTGCAGCCAAGAAGGTCTCCAAGAAAGGCAAAGAGGCCAAAGACACGGAGGTCAAACGGGG
CCAGGCCAGGAAGGCTCCCAGGAAGTCAAACAAGGCCACACAGGCCTCTGCTGGTCCTAAGAACAATGGGAAACCAAAGG
TCAAAGGCCACAGGAAAAGCCAAGGAGAGGCCAAAGCTCCCAGGAAAACCAGTGCCGCCGACAGCAAGAGTTCTAAACCC
ACAGCCAGAAAGGTCAAAAACAGTGGTGTTGCTTCCCTGACTAAGAAGAAGACAGCAGCCAAGGCCCCTGAAGCAGAGGA
GAGGCCCAAAGCCAAAGCCGCTCCACCTAAGGGCCAAGGGTCCAAGGCTGGGTATGCACACCTAGCTGGGGAGCCAAAGG
CTCCCAGAAGTTCGAGAAAGCCTGGGCTGTCTGCCAAGGCCTCAGCACCCAAGGCCCTCAACGCCAAGAAGGCAAAAGCC
AGG
ATGGAGCCCAACGCCATCCCCAGCGGCGACTCCTCCGCCCCCTTGGCCCCCGCGGCCAAGCTGCCAGACCCTACCGAGCC
AGGCAGCCTCACGCAGAGCCGCAAACCCACGATGCTGCGCATGGTGCTAGAGGCGCTGCAGGCGAGCGAACGGCGCCAAG
GCACGTCAGTGATGGCCATCAAGCTCTACATCCTGCGCAAGTATCCGACTGTGCACAGCCTGCGCTTCAAGTACCTGCTC
AAGCAGGCCCTGGCCACCGGCATGAGTCGAGGCCTCCTCACCAGGCCCCTCCACTCCAAGGCCAAGGGCGCCACTGGCAG
CTTCAAATTGGTGTCCGAGCGCAAGAACACAACTCAGCCCAGGAAGGCCAGGAAGGGGAAGGCCGGAAAAGCGGGGAAGG
CCAAGGAGCCAGTCTCCAAGAAACCTAGAGAGGCCGACGGCCAGGTGGGACAGGCACACAAGAAGCCGGGTGCCGTGGGG
AAGGTGCCTCCTAAGCCAGGTGCAGCCAAGAAGGTCTCCAAGAAAGGCAAAGAGGCCAAAGACACGGAGGTCAAACGGGG
CCAGGCCAGGAAGGCTCCCAGGAAGTCAAACAAGGCCACACAGGCCTCTGCTGGTCCTAAGAACAATGGGAAACCAAAGG
TCAAAGGCCACAGGAAAAGCCAAGGAGAGGCCAAAGCTCCCAGGAAAACCAGTGCCGCCGACAGCAAGAGTTCTAAACCC
ACAGCCAGAAAGGTCAAAAACAGTGGTGTTGCTTCCCTGACTAAGAAGAAGACAGCAGCCAAGGCCCCTGAAGCAGAGGA
GAGGCCCAAAGCCAAAGCCGCTCCACCTAAGGGCCAAGGGTCCAAGGCTGGGTATGCACACCTAGCTGGGGAGCCAAAGG
CTCCCAGAAGTTCGAGAAAGCCTGGGCTGTCTGCCAAGGCCTCAGCACCCAAGGCCCTCAACGCCAAGAAGGCAAAAGCC
AGG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017209 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000000094 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000178804 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000735 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000025226 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000029379 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013414 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015380 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000007110 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011276 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_403 | 82.77 | 72.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_624 | 78.00 | 60.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000010371 retrocopies