Parental gene:

H1FOO, ENSPPYG00000013414

Aliases:None
Description:H1 histone family, member O, oocyte-specific [Source:HGNC Symbol;Acc:18463]
Organism:Orangutan (Pongo abelii)
Coordinates:3:3099020..3107081(-)


>ENSPPYG00000013414
ATGGCTTCTGGGAGTGTCACCAGCGACATCTCACCCTCCTCGACTTCCACAGCAGGATCATCCAGGTCTCCTGAATCTGA
AAAGCCAGGCCCGAGCCACAGCAGCCTCCCGGTGGGACGCCGCCACCCCCCGGTGCTGCGCATGGTGCTGGAGGCGCTGC
AGGCGGGGGAGCAGCGCCGGGGCACATCGGTGGCGGCTATCAAGCTCTACATCCTGCACAAGTACCCAACAGTGGATGTC
CTCCGCTTCAAGTACCTGCTGAAGCAGGCGCTGGCCACTGGCATGCGCCGTGGCCTCCTCGCCAGGCCCCTCAACTCCAA
AGCCAGGGGGGCCACTGGCAGCTTCAAATTAGTTCCCAAGCACAAGGGGAAAATCCAGCCCAGGAAGATGGCTCCCCCGA
CGGCTCCCAGGAGAGCAGGCGAGGCCAAGGGGAAGGGCCCCAAGAAACCAAGTGAGGCCAAGGAGGACCCTCCCAACGTG
GGCAAGGTGAAAAAGGCAGCCAAGAGGCCAGCAAAGGTGCAGAAGGCTCCTCCCAAGCCAGGCGCAGCCACAGAAAAGCC
TCGCAAGCAAGGCGGCGCAGCCAAGGACACCAGGGCACAGTCAGGAGAGGCCAGGAAGGTGCCCCCCAAGCCAGACAAGG
CCATGCGGGCACCTTCCAGTACCGGCCGGCTCAGCAGGAAGGCAAAGGCCAAAGGCAGCAGGAGCAGCCAAGGAGATGCT
GAGGCCTACAGGAGAACCAAAGCTGAGAGTAAGAGTTCAAAACCCACGGCCAGCAAGGTCAAGAATGGTGCTGCTTCCCC
GACCAAAAAGAAGGTGGTGGCCAAGGCCAAGGCCCCTAAAGCCCCTAAAGCAAACACCAAGGCTGCTGCTCCTGCTAAGG
GCAGTGGGTCCAAGGTGGTACCTGCACACTTGTCCAGGAAGACAGAGGCCCCCAAGGGCCCGAGAAAGGCTGGGCTGCCC
ATCAAGGCCTCATCATCCAAAGTGTCCAGCCAGAGGGCTGAAGCTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017209 ortholog_one2many 2 retrogenes
retro_cjac_3976, retro_cjac_981,
Felis catus ENSFCAG00000000094 ortholog_one2one 2 retrogenes
retro_fcat_1139, retro_fcat_416,
Homo sapiens ENSG00000178804 ortholog_one2one 1 retrogene
retro_hsap_2799,
Gorilla gorilla ENSGGOG00000000735 ortholog_one2one 1 retrogene
retro_ggor_1946,
Myotis lucifugus ENSMLUG00000025226 ortholog_one2one 2 retrogenes
retro_mluc_1278, retro_mluc_1318,
Oryctolagus cuniculus ENSOCUG00000029379 ortholog_one2one 1 retrogene
retro_ocun_1483,
Ochotona princeps ENSOPRG00000010371 ortholog_one2one 2 retrogenes
retro_opri_403, retro_opri_624,
Pan troglodytes ENSPTRG00000015380 ortholog_one2one 1 retrogene
retro_ptro_1896,
Pteropus vampyrus ENSPVAG00000007110 ortholog_one2one 1 retrogene
retro_pvam_808,
Tursiops truncatus ENSTTRG00000011276 ortholog_one2one 1 retrogene
retro_ttru_1111,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2225 71.55 68.36
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Download FASTA sequences of all ENSPPYG00000013414 retrocopies