Parental gene: | KPNA7, ENSOPRG00000015434 |
| Aliases: | None |
| Description: | karyopherin alpha 7 (importin alpha 8) [Source:HGNC Symbol;Acc:21839] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_4678:6493..57412(-) |
>ENSOPRG00000015434
ATGCCTGCTCTAGACGCTCCCGAGGAGAGGCTGAGGAAGTTCAAATACCGAGGCAAAGATGCATCTATGAGGCGGCACCA
GCGCCTGGTGGCTAGCCTGGAGCTCCGGAAGGCCAGGAAAGATGAGCAGGCCTTGAAGAGGAGGAATATCACCAATTTCC
CTCCCGAGCCATCTTCGGAAAAACCTGCCAAAGAGGTGTGTGTCAGCCTCAATCTGGATGAAATCGTGAGAGGTGTGAAC
AGCTCAGACCCTGACCTTTGCTTCCAGGCCACCCTTGCAGTCAGGAAAATGCTGTCCCAGGAAAGGAACCCCCCTCTGAA
GATGATTATTGACATGGGGCTTATCCCCAGGCTGGTGGCGGTTCCTGAGTCATCGTTGCCCTTCTTGCAGTTTGAGGCAG
CCTGGACCTCTGACAACATCGTATCTGGTACTTCGAGCCAGATTCTGGCCGTTGTGGAAGCAGCCATCCAGCCTCTGATG
GAGCTACTGGACTCAACCGCAGCCGTGTGTGAGCAGGCAAGGTCTCTCTGCAACATAGCCGGTGATGGCCCCGAGTTCAG
AGATGCTGTCATTTCAAGCAATGCCATCCCACATCTGCTGGCCCTGGTTTGCCCAACTATAACAGTCGCATTTCTGCGGA
ACATCACATGGACCTTGTCCAACCTGTGCCGGAACAAGAATCCGTATCCTTGCGACGAGGCGGTGAGGCAGCTGCTGCCT
GTTCTCTTCCACCTCCTGCAGCACCATGACAGAGAGATTGTCTCGGACACCTGCTGGGCCTTGTCCTACCTCACAGAGGG
CTGCAACGAGCGCATTGACCGAGTGGTCAACATTGGGGTCTTGCCCAGGCTGGTAGAGCTCATGACCAGCCAGGAGCTCA
GCATCCTGATTCCTTCTCTCCGCACGGTGGGGAACATTGTCACAGGAACTGAACACCAGACCCAGATGGCCATCGACGCA
GGTCTGCTGAAGGTGCTGCCCCACCTCCTGAGGCACCCCAAAACCTCCATCCAGAAGGAGGCGGCCTGGGTCCTAAGCAA
TGTGGCTGCAGGATCTCAACAGCAAATCCAGCTGCTGATTGTGTACGACTTGCTGCCTCTCTTGGTGGCTCTGCTGAAAA
ATGGGGAGTTTCAAGTCCAGAAGGAGGCAGTCTGGACGGTGGCCAACTTCACAATGGGGGCCACTGTGAGCCAGTTGTTC
CAGCTGGTCTACTCGGGGGTCTTGGAGCCCCTGGTGAATCTGCTCACCGCTCCAGATCCTAAGATTGTCCTCATCATCCT
TGATGTCATCTCTTACTTCCTCCAGGAAGCAGAGAAGCTGCGTGAGAAGGACAGACTATACTTTCTGATAGAAGGGCTTG
GCGGGATTGAAAGAATTGAGACCTTGCAGCTGCACGTGAATCAGCAGATCGCGCAGACCGCCCTGAGCCTCATCGAGAAG
CACTTTGGCGAGGTCAGTGACCCG
ATGCCTGCTCTAGACGCTCCCGAGGAGAGGCTGAGGAAGTTCAAATACCGAGGCAAAGATGCATCTATGAGGCGGCACCA
GCGCCTGGTGGCTAGCCTGGAGCTCCGGAAGGCCAGGAAAGATGAGCAGGCCTTGAAGAGGAGGAATATCACCAATTTCC
CTCCCGAGCCATCTTCGGAAAAACCTGCCAAAGAGGTGTGTGTCAGCCTCAATCTGGATGAAATCGTGAGAGGTGTGAAC
AGCTCAGACCCTGACCTTTGCTTCCAGGCCACCCTTGCAGTCAGGAAAATGCTGTCCCAGGAAAGGAACCCCCCTCTGAA
GATGATTATTGACATGGGGCTTATCCCCAGGCTGGTGGCGGTTCCTGAGTCATCGTTGCCCTTCTTGCAGTTTGAGGCAG
CCTGGACCTCTGACAACATCGTATCTGGTACTTCGAGCCAGATTCTGGCCGTTGTGGAAGCAGCCATCCAGCCTCTGATG
GAGCTACTGGACTCAACCGCAGCCGTGTGTGAGCAGGCAAGGTCTCTCTGCAACATAGCCGGTGATGGCCCCGAGTTCAG
AGATGCTGTCATTTCAAGCAATGCCATCCCACATCTGCTGGCCCTGGTTTGCCCAACTATAACAGTCGCATTTCTGCGGA
ACATCACATGGACCTTGTCCAACCTGTGCCGGAACAAGAATCCGTATCCTTGCGACGAGGCGGTGAGGCAGCTGCTGCCT
GTTCTCTTCCACCTCCTGCAGCACCATGACAGAGAGATTGTCTCGGACACCTGCTGGGCCTTGTCCTACCTCACAGAGGG
CTGCAACGAGCGCATTGACCGAGTGGTCAACATTGGGGTCTTGCCCAGGCTGGTAGAGCTCATGACCAGCCAGGAGCTCA
GCATCCTGATTCCTTCTCTCCGCACGGTGGGGAACATTGTCACAGGAACTGAACACCAGACCCAGATGGCCATCGACGCA
GGTCTGCTGAAGGTGCTGCCCCACCTCCTGAGGCACCCCAAAACCTCCATCCAGAAGGAGGCGGCCTGGGTCCTAAGCAA
TGTGGCTGCAGGATCTCAACAGCAAATCCAGCTGCTGATTGTGTACGACTTGCTGCCTCTCTTGGTGGCTCTGCTGAAAA
ATGGGGAGTTTCAAGTCCAGAAGGAGGCAGTCTGGACGGTGGCCAACTTCACAATGGGGGCCACTGTGAGCCAGTTGTTC
CAGCTGGTCTACTCGGGGGTCTTGGAGCCCCTGGTGAATCTGCTCACCGCTCCAGATCCTAAGATTGTCCTCATCATCCT
TGATGTCATCTCTTACTTCCTCCAGGAAGCAGAGAAGCTGCGTGAGAAGGACAGACTATACTTTCTGATAGAAGGGCTTG
GCGGGATTGAAAGAATTGAGACCTTGCAGCTGCACGTGAATCAGCAGATCGCGCAGACCGCCCTGAGCCTCATCGAGAAG
CACTTTGGCGAGGTCAGTGACCCG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015125 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000004243 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015943 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000000554 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000096 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000185467 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000038770 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010827 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031106 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000017369 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019446 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009007 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002998 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_118 | 89.13 | 94.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_1101 | 89.13 | 94.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000015434 retrocopies