Parental gene: | KPNA7, ENSPTRG00000019446 |
| Aliases: | None |
| Description: | karyopherin alpha 7 (importin alpha 8) [Source:HGNC Symbol;Acc:21839] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 7:99713974..99748812(-) |
>ENSPTRG00000019446
ATGCCGACCTTAGATGCTCCAGAAGAGAGGCGGAGAAAATTTAAGTACCGAGGCAAAGATGCATCTCTGAGGCGACAGCA
GAGGATGGCAGTCAGCCTGGAGCTCCGAAAGGCCAAGAAAGATGAACAGACCTTAAAGAGAAGGAATATCATGAGCTTCT
GCCCTGACACACCTTCTGAAAAAACAGCCAAAGGGGTGGCGGTCAGCCTCACTCTGGGTGAAATAATCGAAGGTGTGAAT
AGCTCAGATCCAGTCCTATGTTTCCAGGCCACCCAGACAGCCAGGAAAATGCTATCCCGGGAAAAGAACCCCCCTCTGAA
ACTGGTCATTGAAGCGGGCCTCATTCCCAGGATGGTGGAGTTCCTGAAGTCATCACTTTACCCCTGCTTGCAGTTTGAGG
CTGCCTGGGCCCTGACCAACATCGCTTCAGGGACTTCGGAGCAGACTCGTGCCGTGGTAGAAGGGGGAGCCATCCAGCCC
TTGATTGAGCTCCTGTCTTCCTCCAACGTGGCTGTGTGTGAACAGGCAGTGTGGGCTCTTGGTAATATAGCCGGTGATGG
CCCAGAGTTCAGAGATAACGTCATCACAAGCAATGCCATCCCACATCTGCTAGCCTTGATTTCACCCACCCTGCCGATCA
CATTTCTGCGGAACATCACGTGGACCTTGTCGAATCTGTGCCGAAACAAGAACCCATACCCTTGCGACACTGCGGTGAAG
CAGATACTGCCGGCCCTCCTTCACCTCCTGCAGCACCAGGACAGTGAGGTTCTCTCGGACGCCTGCTGGGCACTGTCCTA
CCTCACCGACGGCTCCAACAAGCGCATCGGCCAAGTGGTTAACACGGGGGTCCTGCCCAGGCTGGTAGTGCTCATGACCA
GCTCAGAACTCAATGTCTTGACTCCTTCTCTCCGCACCGTGGGGAACATTGTCACGGGCACAGATGAGCAGACGCAGATG
GCCATTGATGCGGGTATGCTGAACGTGCTCCCCCAGCTCCTGCAACACAACAAGCCCTCCATCCAAAAGGAGGCAGCCTG
GGCCCTGAGCAACGTAGCAGCGGGGCCTTGTCACCACATCCAGCAGCTGCTTGCCTACGACGTCTTGCCTCCCTTGGTGG
CTCTGCTAAAAAACGGAGAATTTAAAGTCCAGAAAGAGGCTGTTTGGACGGTGGCAAACTTTGCAACAGGGGCCACCATG
GATCAGCTGATCCAGCTCGTCCACTCTGGGGTCCTGGAGCCACTGGTGAATCTGCTCACTGCCCCAGATGTTAAAATTGT
TCTCATCATCCTTGATGTCATCTCTTGCATCCTCCAGGCAGCAGAGAAACGGTCTGAGAAGGAAAACCTGTGTCTTCTGA
TAGAAGAACTTGGTGGGATCGATAGAATTGAGGCTTTACAGCTGCATGAGAACCGTCTAATTGGCCAGTCGGCTTTGAAC
ATCATCGAGAAGCACTTTGGTGAGGAAGAAGATGAGAGCCAAACTTTACTGAGCCAAGTCATAGACCAAGATTATGAATT
TATAGATTATGAATGCTTAGCAAAAAAATAG
ATGCCGACCTTAGATGCTCCAGAAGAGAGGCGGAGAAAATTTAAGTACCGAGGCAAAGATGCATCTCTGAGGCGACAGCA
GAGGATGGCAGTCAGCCTGGAGCTCCGAAAGGCCAAGAAAGATGAACAGACCTTAAAGAGAAGGAATATCATGAGCTTCT
GCCCTGACACACCTTCTGAAAAAACAGCCAAAGGGGTGGCGGTCAGCCTCACTCTGGGTGAAATAATCGAAGGTGTGAAT
AGCTCAGATCCAGTCCTATGTTTCCAGGCCACCCAGACAGCCAGGAAAATGCTATCCCGGGAAAAGAACCCCCCTCTGAA
ACTGGTCATTGAAGCGGGCCTCATTCCCAGGATGGTGGAGTTCCTGAAGTCATCACTTTACCCCTGCTTGCAGTTTGAGG
CTGCCTGGGCCCTGACCAACATCGCTTCAGGGACTTCGGAGCAGACTCGTGCCGTGGTAGAAGGGGGAGCCATCCAGCCC
TTGATTGAGCTCCTGTCTTCCTCCAACGTGGCTGTGTGTGAACAGGCAGTGTGGGCTCTTGGTAATATAGCCGGTGATGG
CCCAGAGTTCAGAGATAACGTCATCACAAGCAATGCCATCCCACATCTGCTAGCCTTGATTTCACCCACCCTGCCGATCA
CATTTCTGCGGAACATCACGTGGACCTTGTCGAATCTGTGCCGAAACAAGAACCCATACCCTTGCGACACTGCGGTGAAG
CAGATACTGCCGGCCCTCCTTCACCTCCTGCAGCACCAGGACAGTGAGGTTCTCTCGGACGCCTGCTGGGCACTGTCCTA
CCTCACCGACGGCTCCAACAAGCGCATCGGCCAAGTGGTTAACACGGGGGTCCTGCCCAGGCTGGTAGTGCTCATGACCA
GCTCAGAACTCAATGTCTTGACTCCTTCTCTCCGCACCGTGGGGAACATTGTCACGGGCACAGATGAGCAGACGCAGATG
GCCATTGATGCGGGTATGCTGAACGTGCTCCCCCAGCTCCTGCAACACAACAAGCCCTCCATCCAAAAGGAGGCAGCCTG
GGCCCTGAGCAACGTAGCAGCGGGGCCTTGTCACCACATCCAGCAGCTGCTTGCCTACGACGTCTTGCCTCCCTTGGTGG
CTCTGCTAAAAAACGGAGAATTTAAAGTCCAGAAAGAGGCTGTTTGGACGGTGGCAAACTTTGCAACAGGGGCCACCATG
GATCAGCTGATCCAGCTCGTCCACTCTGGGGTCCTGGAGCCACTGGTGAATCTGCTCACTGCCCCAGATGTTAAAATTGT
TCTCATCATCCTTGATGTCATCTCTTGCATCCTCCAGGCAGCAGAGAAACGGTCTGAGAAGGAAAACCTGTGTCTTCTGA
TAGAAGAACTTGGTGGGATCGATAGAATTGAGGCTTTACAGCTGCATGAGAACCGTCTAATTGGCCAGTCGGCTTTGAAC
ATCATCGAGAAGCACTTTGGTGAGGAAGAAGATGAGAGCCAAACTTTACTGAGCCAAGTCATAGACCAAGATTATGAATT
TATAGATTATGAATGCTTAGCAAAAAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .05 RPM |
| SRP007412_cerebellum | 0 .14 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .05 RPM |
| SRP007412_liver | 0 .07 RPM |
| SRP007412_testis | 4 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015125 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000004243 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015943 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000000554 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000096 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000185467 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000038770 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010827 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031106 | ortholog_one2many | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000015434 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000017369 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009007 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002998 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_102 | 54.71 | 97.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2142 | 81.35 | 96.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000019446 retrocopies