Parental gene:

SUMO1, ENSPCAG00000006870

Aliases:None
Description:small ubiquitin-like modifier 1 [Source:HGNC Symbol;Acc:12502]
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_4683:237821..289689(-)


>ENSPCAG00000006870
CGGAAGTGCCTCCAGCCGCGGTGTTGTGCTGTGGAGAGAGACGGATTTGTAAACCCCGGAGCGAGATTCGGCCTGCCCGC
GGTCGCTGCTGTGCGGAGACCCCCGGGTGAAGCCACCGTCACCATGTCTGACCAGGAGGCAAAACCTTCAACTGAGGACT
TGGGGGATAAGAAAGAAGGAGAATACATCAAACTCAAAGTTATTGGACAGGATAGCAGTGAGATTCACTTCAAGGTGAAA
ATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAAGAGGAGTTCCAATGAATTCACTCAGGTTTCTCTTTGA
AGGTCAGAGAATTGCTGATAATCACACTCCGAAAGAACTGGGTATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAAC
AAACGGGGGGTCATTCAACAGTTTAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009859 ortholog_one2many 6 retrogenes
retro_btau_112, retro_btau_1512, retro_btau_1705, retro_btau_357, retro_btau_363, retro_btau_499,
Canis familiaris ENSCAFG00000012431 ortholog_one2many 8 retrogenes
retro_cfam_1226, retro_cfam_1253, retro_cfam_139, retro_cfam_1815, retro_cfam_1912, retro_cfam_2048, retro_cfam_386, retro_cfam_985,
Felis catus ENSFCAG00000031005 ortholog_one2one 6 retrogenes
retro_fcat_1520, retro_fcat_218, retro_fcat_26, retro_fcat_472, retro_fcat_6, retro_fcat_862,
Loxodonta africana ENSLAFG00000022855 ortholog_one2one 5 retrogenes
retro_lafr_111, retro_lafr_1148, retro_lafr_189, retro_lafr_540, retro_lafr_951,
Microcebus murinus ENSMICG00000008968 ortholog_one2one 5 retrogenes
retro_mmur_1177, retro_mmur_1300, retro_mmur_1493, retro_mmur_1554, retro_mmur_1602,
Myotis lucifugus ENSMLUG00000007504 ortholog_one2one 2 retrogenes
retro_mluc_1346, retro_mluc_188,
Macaca mulatta ENSMMUG00000005240 ortholog_one2one 7 retrogenes
retro_mmul_1108, retro_mmul_2035, retro_mmul_2081, retro_mmul_313, retro_mmul_373, retro_mmul_450, retro_mmul_855,
Otolemur garnettii ENSOGAG00000030345 ortholog_one2one 1 retrogene
retro_ogar_215,
Pongo abelii ENSPPYG00000013083 possible_ortholog 3 retrogenes
retro_pabe_11, retro_pabe_1830, retro_pabe_775,
Pan troglodytes ENSPTRG00000012817 possible_ortholog 1 retrogene
retro_ptro_119,
Sarcophilus harrisii ENSSHAG00000011968 ortholog_one2one 1 retrogene
retro_shar_375,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_136 54.17 82.27
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Download FASTA sequences of all ENSPCAG00000006870 retrocopies