Parental gene: | ENSFCAG00000031005 |
| Aliases: | None |
| Description: | None |
| Organism: | Cat (Felis catus) |
| Coordinates: | C1:188033705..188047311(-) |
>ENSFCAG00000031005
CTTTTTTTTCAGGAGGCAAAACCTTCAACTGAAGACTTGGGGGATAAGAAGGAAGGAGAATACATTAAACTCAAAGTCAT
TGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAA
GACAGGGAGTTCCAATGAATTCACTCAGGTTTCTCTTTGAAGGTCAGAGAATTGCTGATAATCACACTCCAAAAGAACTG
GGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACAGGGGGTCATTCAACGATTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 24 .56 RPM |
| SRP017611_kidney | 26 .69 RPM |
| SRP017611_liver | 10 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013225 | possible_ortholog | 5 retrogenes | |
| Bos taurus | ENSBTAG00000009859 | ortholog_one2many | 6 retrogenes | |
| Canis familiaris | ENSCAFG00000012431 | ortholog_one2many | 8 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000009739 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004961 | possible_ortholog | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000012143 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000015868 | possible_ortholog | 10 retrogenes | |
| Equus caballus | ENSECAG00000024693 | possible_ortholog | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000013161 | possible_ortholog | 6 retrogenes | |
| Felis catus | ENSFCAG00000026550 | within_species_paralog | 4 retrogenes | |
| Homo sapiens | ENSG00000116030 | possible_ortholog | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026439 | possible_ortholog | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000022855 | ortholog_one2one | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000008968 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007504 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000005240 | ortholog_one2one | 7 retrogenes | |
| Mustela putorius furo | ENSMPUG00000000335 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000026021 | possible_ortholog | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006997 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030345 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000006870 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013083 | possible_ortholog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000012817 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016133 | possible_ortholog | 2 retrogenes | |
| Sorex araneus | ENSSARG00000008205 | possible_ortholog | 8 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011968 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000025405 | possible_ortholog | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000642 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_6 | 79.59 | 97.03 | Please wait, loading  |
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| 2. | retro_fcat_26 | 84.62 | 90.10 | Please wait, loading |
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| 3. | retro_fcat_218 | 85.86 | 97.03 | Please wait, loading |
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| 4. | retro_fcat_472 | 77.36 | 52.48 | Please wait, loading |
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| 5. | retro_fcat_862 | 88.76 | 88.12 | Please wait, loading |
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| 6. | retro_fcat_1520 | 86.32 | 92.08 | Please wait, loading |
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Download FASTA sequences of all ENSFCAG00000031005 retrocopies