Parental gene: | HMGA1, ENSPCAG00000016076 |
| Aliases: | None |
| Description: | high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:5010] |
| Organism: | Hyrax (Procavia capensis) |
| Coordinates: | scaffold_16820:23429..27987(+) |
>ENSPCAG00000016076
ATGAGCGAATCGAGCTCGAAGTCCAGCCAGCCCTTGGCCTCCAAGCAGGAAAAGGACGGCACTGAGAAGCGGGGGCGGGG
CAGGCCTCGCAAGCAGCCTCCGGTGAGTCCTGGTACAGCGCTGGTAGGGAGTCAGAAAGAGCCCAGTGAAGTGCCAACAC
CTAAGAGACCTCGGGGCCGACCAAAGGGGAGCAAAAACAAGGGGAGAAGGAGGAAGAAGAGGGCATCTCCCAGGAGTCCT
CGGAGGAGGAGCAGTGACCTGTGCACTCGGCTCCAGCCCGACCTGAGGAGCCGCTTTCTTCTGGGACTGGACGGCTTCGC
TCTGCTCCCACCCCTGTCCCCCCAGGCCCACCATCACCAC
ATGAGCGAATCGAGCTCGAAGTCCAGCCAGCCCTTGGCCTCCAAGCAGGAAAAGGACGGCACTGAGAAGCGGGGGCGGGG
CAGGCCTCGCAAGCAGCCTCCGGTGAGTCCTGGTACAGCGCTGGTAGGGAGTCAGAAAGAGCCCAGTGAAGTGCCAACAC
CTAAGAGACCTCGGGGCCGACCAAAGGGGAGCAAAAACAAGGGGAGAAGGAGGAAGAAGAGGGCATCTCCCAGGAGTCCT
CGGAGGAGGAGCAGTGACCTGTGCACTCGGCTCCAGCCCGACCTGAGGAGCCGCTTTCTTCTGGGACTGGACGGCTTCGC
TCTGCTCCCACCCCTGTCCCCCCAGGCCCACCATCACCAC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015226 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000019529 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000046711 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029838 | ortholog_one2one | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000014283 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000488 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pcap_236 | 80.00 | 72.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPCAG00000016076 retrocopies