Parental gene:

HMGA1, ENSPVAG00000014283

Aliases:None
Description:high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:5010]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_11751:37670..42556(+)


>ENSPVAG00000014283
ATGAGCGAGTCAAGTTCGAAGTCCAGCCAGCCCTTGGCCTCCAAGCAGGAAAAGGATGGCACTGAGAAGCGAGGGCGGGG
CAGGCCTCGTAAGCAGCCTCCGGTGAGTCCCGGGACAACGCTGGTAGGGAGTCAGAAGGAACCCAGTGAAGTGCCAACAC
CTAAGAGACCTCGGGGCCGACCAAAGGGGAGCAAAAACAAGGGGAGAAGGAGGAAGAAGAGGGCATCTCGCAGGAGTCCT
CAGAGGAGGAGCAGTGACCGCGCCGTGCCACCTGCTTCCTCATCGAGGAGCAGTTTCCTTCTGGGACTGGACGCTCCGCT
CCCACTGCCCCCCTGCCCCTTCCCCCAGGCCCACCATCACCGCCACACCTGCGCCTGCACCGCCACACTACACAGCACAC
CAGCCGCTGCAGGGCCCTGGTGGCCCAGGTGGGGAGCAGTTTTCCTTTGGTCTCGGATCCCAGCGCCCCTCCCTCACCCA
CGTGCACACACTTGCCCTCAAAGCTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015226 possible_ortholog 2 retrogenes
retro_cjac_1197, retro_cjac_3158,
Macaca mulatta ENSMMUG00000019529 possible_ortholog 2 retrogenes
retro_mmul_1276, retro_mmul_2406,
Mus musculus ENSMUSG00000046711 ortholog_one2many 1 retrogene
retro_mmus_188,
Procavia capensis ENSPCAG00000016076 ortholog_one2one 1 retrogene
retro_pcap_236,
Pongo abelii ENSPPYG00000029838 ortholog_one2one 4 retrogenes
retro_pabe_1941, retro_pabe_2441, retro_pabe_3623, retro_pabe_960,
Rattus norvegicus ENSRNOG00000000488 ortholog_one2many 1 retrogene
retro_rnor_164,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_116 53.39 65.48
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Download FASTA sequences of all ENSPVAG00000014283 retrocopies