Parental gene: | PDHB, ENSPCAG00000016595 |
| Aliases: | None |
| Description: | pyruvate dehydrogenase (lipoamide) beta [Source:HGNC Symbol;Acc:8808] |
| Organism: | Hyrax (Procavia capensis) |
| Coordinates: | scaffold_5134:4564..9974(+) |
>ENSPCAG00000016595
ATGGCGGCGGCGTCCGGCCTGGTGCGGAGGCGTCTTCGGCAGGTGTCTGGGCTGCTGAGGAGGCACTTCCACCGGACGGC
GCCGGCGGCGCTGCAGGTGACAGTTCGTGATGCCATAAATCAAGGGATGGATGAGGAGCTGGAGAGAGATGAGAAAGTTT
TTCTGCTGGGCGAGGAGGTTGCCCAGTATGACGGGGCATACAAGGTTAGCCGCGGCCTATGGAAAAAATATGGAGACAAG
AGAATCATAGACACCCCCATATCTGAGATGGGCTTTGCTGGAATTGCCGTCGGTGCGGCTATGGCGGGGTTGCGGCCTAT
TTGTGAATTCATGACCTTCAATTTCTCCATGCAAGCCATCGATCAGGTTATCAACTCAGCTGCCAAGACCTACTACATGT
CCGGGGGCCGTCAGCCTGTGCCCATTGTCTTCAGGGGACCCAACGGCGCCTCCGCATGTGTGGCCGCTCAGCACTCGCAG
TGCTTTGCCGCCTGGTATGGCCACTGTCCAGGCTTAAAGGTGGTCAGCCCCTGGAACGCAGAGGACGCAAAAGGACTCAT
CAAATCAGCCATTCGGGATAACAATCCAGTGGTGATGCTGGAAAATGAGTTGATGTATGGGGTTCCTTTTGAATTCCCTG
AGGCAGCTCAGTCAAAAGACTTTCTTATTCCTATTGGAAAAGCCAAAATAGAAAGGCCAGGGACACATGTGACGTTGGTT
TCCCACTCAAGACCTGTCGGTCACTGCTTAGAAGCTGCGACGGTGCTGTCCAAAGAGGGAATTGAGTGTGAGGTGATAAA
CATGCGTACCATCAGGCCCATGGACATTGAAACCATAGAAGCCAGTGTCGTCAAGACAAATCATCTCGTGACCGTTGAAG
GAGGCTGGCCACAGTTTGGAGTAGGAGCTGAAATCTGTGCCAAGATCATGGAAGGTCCTGCTTTCAATTACCTGGATGCT
CCTGCTGTTCGCGTCACAGGTGCTGACGTCCCTATGCCTTACGCAAAGATTCTGGAAGATAACTCTGTACCTCAGGTCAA
AGACATCATATTTGCCGTAAAGAAGACGTTAAACGTCTAG
ATGGCGGCGGCGTCCGGCCTGGTGCGGAGGCGTCTTCGGCAGGTGTCTGGGCTGCTGAGGAGGCACTTCCACCGGACGGC
GCCGGCGGCGCTGCAGGTGACAGTTCGTGATGCCATAAATCAAGGGATGGATGAGGAGCTGGAGAGAGATGAGAAAGTTT
TTCTGCTGGGCGAGGAGGTTGCCCAGTATGACGGGGCATACAAGGTTAGCCGCGGCCTATGGAAAAAATATGGAGACAAG
AGAATCATAGACACCCCCATATCTGAGATGGGCTTTGCTGGAATTGCCGTCGGTGCGGCTATGGCGGGGTTGCGGCCTAT
TTGTGAATTCATGACCTTCAATTTCTCCATGCAAGCCATCGATCAGGTTATCAACTCAGCTGCCAAGACCTACTACATGT
CCGGGGGCCGTCAGCCTGTGCCCATTGTCTTCAGGGGACCCAACGGCGCCTCCGCATGTGTGGCCGCTCAGCACTCGCAG
TGCTTTGCCGCCTGGTATGGCCACTGTCCAGGCTTAAAGGTGGTCAGCCCCTGGAACGCAGAGGACGCAAAAGGACTCAT
CAAATCAGCCATTCGGGATAACAATCCAGTGGTGATGCTGGAAAATGAGTTGATGTATGGGGTTCCTTTTGAATTCCCTG
AGGCAGCTCAGTCAAAAGACTTTCTTATTCCTATTGGAAAAGCCAAAATAGAAAGGCCAGGGACACATGTGACGTTGGTT
TCCCACTCAAGACCTGTCGGTCACTGCTTAGAAGCTGCGACGGTGCTGTCCAAAGAGGGAATTGAGTGTGAGGTGATAAA
CATGCGTACCATCAGGCCCATGGACATTGAAACCATAGAAGCCAGTGTCGTCAAGACAAATCATCTCGTGACCGTTGAAG
GAGGCTGGCCACAGTTTGGAGTAGGAGCTGAAATCTGTGCCAAGATCATGGAAGGTCCTGCTTTCAATTACCTGGATGCT
CCTGCTGTTCGCGTCACAGGTGCTGACGTCCCTATGCCTTACGCAAAGATTCTGGAAGATAACTCTGTACCTCAGGTCAA
AGACATCATATTTGCCGTAAAGAAGACGTTAAACGTCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021724 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000007340 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000019739 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006937 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002398 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021748 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015632 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000008480 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000019553 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000016148 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pcap_261 | 71.22 | 94.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPCAG00000016595 retrocopies