Parental gene:

RAB1B, ENSPPYG00000003031

Aliases:None
Description:RAB1B, member RAS oncogene family [Source:HGNC Symbol;Acc:18370]
Organism:Orangutan (Pongo abelii)
Coordinates:11:9604251..9611976(-)


>ENSPPYG00000003031
ATGAACCCCGAATATGACTACCTGTTTAAGCTGCTTTTGATTGGCGACTCAGGCGTGGGCAAGTCATGCCTGCTCCTGCG
GTTTGCTGATGACACGTACACAGAGAGCTACATCAGCACCATCCGGGGGTGGGACTTCAAGGAATCCATCGAGCTAGATA
AAACTATCAAACTTCAGATCTGGGACACAGCGGGCCAGGAACGGTTCCGGACCATCACTTCCAGCTACTACCGGGGGGCT
CATGGCATCATCGTGGTGTATGACGTCACTGACCAGGAGTCCTACGCCAACGTGAAGCAGTGGCTGCAGGAGATTGACCG
CTATGCCAGTGAGAACGTCAATAAGCTTCTGGTGGGCAACAAGAGCGACCTCACCACCAAGAAGGTGGTGGACAACACCA
CAGCCAAGGAGTTTGCAGACTCTCTGGGCATCCCCTTCTTGGAGACGAGTGCCAAGAACGCCACCAATGTCGAGCAGGCG
TTCATGACCATGGCTGCTGAGATCAAAAAGCGGATGGGGCCTGGGGCAGCCTCCGGGGGCGAGCGGCCCAATCTCAAGAT
TGACAGCACCCCTAAGCCGGCTGGCGGTGGCTGTTGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 44 .84 RPM
SRP007412_cerebellum 25 .66 RPM
SRP007412_heart 16 .95 RPM
SRP007412_kidney 37 .39 RPM
SRP007412_liver 19 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001599 ortholog_one2one 1 retrogene
retro_cjac_931,
Homo sapiens ENSG00000174903 ortholog_one2one 1 retrogene
retro_hsap_4252,
Gorilla gorilla ENSGGOG00000009755 ortholog_one2one 2 retrogenes
retro_ggor_1792, retro_ggor_2850,
Macropus eugenii ENSMEUG00000000023 ortholog_one2one 1 retrogene
retro_meug_1985,
Monodelphis domestica ENSMODG00000008371 ortholog_one2one 1 retrogene
retro_mdom_196,
Pongo abelii ENSPPYG00000012360 within_species_paralog 1 retrogene
retro_pabe_2135,
Pan troglodytes ENSPTRG00000003915 ortholog_one2one 1 retrogene
retro_ptro_2892,
Sarcophilus harrisii ENSSHAG00000010376 ortholog_one2one 1 retrogene
retro_shar_68,
Ictidomys tridecemlineatus ENSSTOG00000011052 ortholog_one2one 1 retrogene
retro_itri_1677,
Drosophila melanogaster FBgn0016700 ortholog_one2many 1 retrogene
retro_dmel_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3386 87.62 99.50
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Download FASTA sequences of all ENSPPYG00000003031 retrocopies