Common name: Fruit fly
Latin name: Drosophila melanogaster
Genome assembly: BDGP5
All retrocopies: 83
Parental genes: 70

Summary: Number of retrocopies :
Conserved ORF: 81 ORF 2 ORF
Expressed retrocopies (EST): 25 EST 58 EST

# RetrogeneDB ID Identity Coverage ORF conservation Expression evidence
1. retro_dmel_1 68.10 % 51.68 % ORF EST
2. retro_dmel_2 61.93 % 53.54 % ORF EST
3. retro_dmel_3 71.14 % 93.71 % ORF EST
4. retro_dmel_4 68.10 % 100.00 % ORF EST
5. retro_dmel_5 51.61 % 74.40 % ORF EST
6. retro_dmel_6 83.13 % 98.81 % ORF EST
7. retro_dmel_7 63.68 % 94.25 % ORF EST
8. retro_dmel_8 63.24 % 74.77 % ORF EST
9. retro_dmel_9 91.99 % 100.00 % ORF EST
10. retro_dmel_10 66.21 % 86.94 % ORF EST
11. retro_dmel_11 64.14 % 74.79 % ORF EST
12. retro_dmel_12 79.87 % 89.33 % ORF EST
13. retro_dmel_13 60.67 % 79.71 % ORF EST
14. retro_dmel_14 55.56 % 74.76 % ORF EST
15. retro_dmel_15 62.76 % 96.66 % ORF EST
16. retro_dmel_16 74.64 % 95.32 % ORF EST
17. retro_dmel_17 73.40 % 58.38 % ORF EST
18. retro_dmel_18 55.63 % 61.73 % ORF EST
19. retro_dmel_19 57.14 % 95.60 % ORF EST
20. retro_dmel_20 57.85 % 97.58 % ORF EST
21. retro_dmel_21 59.93 % 92.35 % ORF EST
22. retro_dmel_22 85.59 % 100.00 % ORF EST
23. retro_dmel_23 82.76 % 95.87 % ORF EST
24. retro_dmel_24 59.81 % 82.66 % ORF EST
25. retro_dmel_25 66.04 % 73.76 % ORF EST
26. retro_dmel_26 56.35 % 96.28 % ORF EST
27. retro_dmel_27 87.69 % 100.00 % ORF EST
28. retro_dmel_28 71.92 % 93.87 % ORF EST
29. retro_dmel_29 61.62 % 76.74 % ORF EST
30. retro_dmel_30 50.33 % 74.15 % ORF EST
31. retro_dmel_31 51.06 % 54.24 % ORF EST
32. retro_dmel_32 56.68 % 99.11 % ORF EST
33. retro_dmel_33 81.54 % 53.72 % ORF EST
34. retro_dmel_34 61.74 % 95.04 % ORF EST
35. retro_dmel_35 59.12 % 81.72 % ORF EST
36. retro_dmel_36 51.20 % 80.98 % ORF EST
37. retro_dmel_37 62.96 % 90.83 % ORF EST
38. retro_dmel_38 67.95 % 98.11 % ORF EST
39. retro_dmel_39 52.70 % 83.15 % ORF EST
40. retro_dmel_40 60.62 % 94.96 % ORF EST
41. retro_dmel_41 50.21 % 80.34 % ORF EST
42. retro_dmel_42 96.68 % 92.05 % ORF EST
43. retro_dmel_43 72.83 % 83.77 % ORF EST
44. retro_dmel_44 64.95 % 99.46 % ORF EST
45. retro_dmel_45 70.89 % 97.73 % ORF EST
46. retro_dmel_46 71.31 % 93.75 % ORF EST
47. retro_dmel_47 67.64 % 94.21 % ORF EST
48. retro_dmel_48 68.03 % 82.26 % ORF EST
49. retro_dmel_49 57.55 % 64.95 % ORF EST
50. retro_dmel_50 76.39 % 97.19 % ORF EST
51. retro_dmel_51 50.24 % 77.70 % ORF EST
52. retro_dmel_52 53.33 % 85.53 % ORF EST
53. retro_dmel_53 97.65 % 100.00 % ORF EST
54. retro_dmel_54 52.43 % 91.96 % ORF EST
55. retro_dmel_55 61.68 % 99.07 % ORF EST
56. retro_dmel_56 79.33 % 98.22 % ORF EST
57. retro_dmel_57 75.89 % 99.22 % ORF EST
58. retro_dmel_58 75.91 % 100.00 % ORF EST
59. retro_dmel_59 79.68 % 92.41 % ORF EST
60. retro_dmel_60 51.80 % 66.80 % ORF EST
61. retro_dmel_61 67.10 % 90.32 % ORF EST
62. retro_dmel_62 70.55 % 89.25 % ORF EST
63. retro_dmel_63 75.10 % 100.00 % ORF EST
64. retro_dmel_64 68.90 % 80.05 % ORF EST
65. retro_dmel_65 86.18 % 95.60 % ORF EST
66. retro_dmel_66 54.58 % 67.39 % ORF EST
67. retro_dmel_67 54.75 % 90.50 % ORF EST
68. retro_dmel_68 56.92 % 56.77 % ORF EST
69. retro_dmel_69 55.45 % 83.93 % ORF EST
70. retro_dmel_70 83.94 % 100.00 % ORF EST
71. retro_dmel_71 70.75 % 60.29 % ORF EST
72. retro_dmel_72 61.63 % 60.28 % ORF EST
73. retro_dmel_73 59.30 % 88.64 % ORF EST
74. retro_dmel_74 74.92 % 85.76 % ORF EST
75. retro_dmel_75 69.12 % 89.47 % ORF EST
76. retro_dmel_76 57.47 % 91.07 % ORF EST
77. retro_dmel_77 52.70 % 100.00 % ORF EST
78. retro_dmel_78 58.45 % 91.12 % ORF EST
79. retro_dmel_79 54.97 % 92.62 % ORF EST
80. retro_dmel_80 51.78 % 97.07 % ORF EST
81. retro_dmel_81 63.70 % 89.30 % ORF EST
82. retro_dmel_82 67.65 % 86.25 % ORF EST
83. retro_dmel_83 88.89 % 68.04 % ORF EST
# Ensembl ID Symbol Description
1. FBgn0003134 Pp1alpha-96A Protein phosphatase 1alpha at 96A [Source:FlyBase gene name;Acc:FBgn0003134]
2. FBgn0015024 CkIalpha Casein kinase Ialpha [Source:FlyBase gene name;Acc:FBgn0015024]
3. FBgn0262736 Vha16-1 Vacuolar H[+] ATPase subunit 16-1 [Source:FlyBase gene name;Acc:FBgn0262736]
4. FBgn0250874 ttm50 tiny tim 50 [Source:FlyBase gene name;Acc:FBgn0250874]
5. FBgn0015622 Cnx99A Calnexin 99A [Source:FlyBase gene name;Acc:FBgn0015622]
6. FBgn0262559 Mdh2 Malate dehydrogenase 2 [Source:FlyBase gene name;Acc:FBgn0262559]
7. FBgn0030268 Klp10A Klp10A [Source:FlyBase gene name;Acc:FBgn0030268]
8. FBgn0037440 CG1041
9. FBgn0031771 CG9140
10. FBgn0025790 TBPH TAR DNA-binding protein-43 homolog [Source:FlyBase gene name;Acc:FBgn0025790]
11. FBgn0030733 CG3560
12. FBgn0001145 Gs2 Glutamine synthetase 2 [Source:FlyBase gene name;Acc:FBgn0001145]
13. FBgn0035400 CG11537
14. FBgn0261439 SdhA Succinate dehydrogenase A [Source:FlyBase gene name;Acc:FBgn0261439]
15. FBgn0010100 Acon Aconitase [Source:FlyBase gene name;Acc:FBgn0010100]
16. FBgn0000557 Ef1alpha100E Elongation factor 1alpha100E [Source:FlyBase gene name;Acc:FBgn0000557]
17. FBgn0035709 eIF4E-4 eIF4E-4 [Source:FlyBase gene name;Acc:FBgn0035709]
18. FBgn0017418 ari-1 ariadne [Source:FlyBase gene name;Acc:FBgn0017418]
19. FBgn0031145 Ntf-2 Nuclear transport factor-2 [Source:FlyBase gene name;Acc:FBgn0031145]
20. FBgn0011726 tsr twinstar [Source:FlyBase gene name;Acc:FBgn0011726]
21. FBgn0040377 Vha36-3 Vacuolar H[+] ATPase subunit 36-3 [Source:FlyBase gene name;Acc:FBgn0040377]
22. FBgn0040066 wds will die slowly [Source:FlyBase gene name;Acc:FBgn0040066]
23. FBgn0033408 CG8800
24. FBgn0032810 CG13077
25. FBgn0031047 Rcd-1 Required for cell differentiation 1 ortholog [Source:FlyBase gene name;Acc:FBgn0031047]
26. FBgn0013305 Nmda1 N-methyl-D-aspartate receptor-associated protein [Source:FlyBase gene name;Acc:FBgn0013305]
27. FBgn0035670 CG10472
28. FBgn0011745 Arp87C Actin-related protein 87C [Source:FlyBase gene name;Acc:FBgn0011745]
29. FBgn0031881 CG3476
30. FBgn0029854 CG3566
31. FBgn0004227 nonA no on or off transient A [Source:FlyBase gene name;Acc:FBgn0004227]
32. FBgn0028552 gammaSnap gamma-soluble NSF attachment protein [Source:FlyBase gene name;Acc:FBgn0028552]
33. FBgn0058045 CG40045
34. FBgn0038017 CG4115
35. FBgn0016041 Tom40 Translocase of outer membrane 40 [Source:FlyBase gene name;Acc:FBgn0016041]
36. FBgn0014869 Pglym78 Phosphoglyceromutase [Source:FlyBase gene name;Acc:FBgn0014869]
37. FBgn0033203 CG2070
38. FBgn0035425 CG17746
39. FBgn0086361 alph alphabet [Source:FlyBase gene name;Acc:FBgn0086361]
40. FBgn0016700 Rab1 Rab-protein 1 [Source:FlyBase gene name;Acc:FBgn0016700]
41. FBgn0033184 CG12736
42. FBgn0259209 Mlp60A Muscle LIM protein at 60A [Source:FlyBase gene name;Acc:FBgn0259209]
43. FBgn0031636 CG12194
44. FBgn0025638 Roc1a Roc1a [Source:FlyBase gene name;Acc:FBgn0025638]
45. FBgn0033603 Cpr47Ef Cuticular protein 47Ef [Source:FlyBase gene name;Acc:FBgn0033603]
46. FBgn0052672 Atg8a Autophagy-specific gene 8a [Source:FlyBase gene name;Acc:FBgn0052672]
47. FBgn0085190 CG34161
48. FBgn0004066 Pros28.1 Proteasome 28kD subunit 1 [Source:FlyBase gene name;Acc:FBgn0004066]
49. FBgn0052675 Tango5 Transport and Golgi organization 5 [Source:FlyBase gene name;Acc:FBgn0052675]
50. FBgn0024315 Picot Picot [Source:FlyBase gene name;Acc:FBgn0024315]
51. FBgn0020513 ade5 ade5 [Source:FlyBase gene name;Acc:FBgn0020513]
52. FBgn0011710 Sep1 Septin-1 [Source:FlyBase gene name;Acc:FBgn0011710]
53. FBgn0051715 CG31715
54. FBgn0004888 Scsalpha Succinyl coenzyme A synthetase alpha subunit [Source:FlyBase gene name;Acc:FBgn0004888]
55. FBgn0000489 Pka-C3 cAMP-dependent protein kinase 3 [Source:FlyBase gene name;Acc:FBgn0000489]
56. FBgn0025806 Rap2l Ras-associated protein 2-like [Source:FlyBase gene name;Acc:FBgn0025806]
57. FBgn0033551 CG7222
58. FBgn0030823 CG8918
59. FBgn0020653 Trxr-1 Thioredoxin reductase-1 [Source:FlyBase gene name;Acc:FBgn0020653]
60. FBgn0015614 CanB2 Calcineurin B2 [Source:FlyBase gene name;Acc:FBgn0015614]
61. FBgn0011288 Snap25 Synapse protein 25 [Source:FlyBase gene name;Acc:FBgn0011288]
62. FBgn0086687 desat1 desat1 [Source:FlyBase gene name;Acc:FBgn0086687]
63. FBgn0027066 Eb1 Eb1 [Source:FlyBase gene name;Acc:FBgn0027066]
64. FBgn0030263 CG2076
65. FBgn0033906 CG8331
66. FBgn0029067 Dd Dullard [Source:FlyBase gene name;Acc:FBgn0029067]
67. FBgn0035600 CG4769
68. FBgn0010497 dmGlut Dietary and metabolic glutamate transporter [Source:FlyBase gene name;Acc:FBgn0010497]
69. FBgn0036820 CG6852
70. FBgn0037402 Vha14-2 Vacuolar H[+] ATPase subunit 14-2 [Source:FlyBase gene name;Acc:FBgn0037402]
Retrogenes FASTA BED
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Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)