Parental gene:

FKBP4, ENSPPYG00000004149

Aliases:None
Description:FK506 binding protein 4, 59kDa [Source:HGNC Symbol;Acc:3720]
Organism:Orangutan (Pongo abelii)
Coordinates:12:2825146..2833275(+)


>ENSPPYG00000004149
ATGACAGCCGAGGAGATGAAGGCGACCGAGAGCGGGGCGCAGTCGGCGCCGCTGCCCATGGAGGGAGTGGACATCAGCCC
CAAACAGGACGAAGGCGTGCTGAAGGTCATCAAGAGAGAGGGCACAGGTACAGAGATGCCCATGATTGGGGACCGAGTCT
TTGTCCACTACACTGGCTGGCTATTAGATGGCACAAAGTTTGACTCCAGTCTGGATCGCAAGGACAAATTCTCCTTTGAC
CTGGGAAAAGGGGAGGTCATCAAGGCTTGGGACATTGCCATAGCAACCATGAAGGTGGGGGAGGTGTGTCACATCACCTG
CAAACCAGAATATGCCTACGGTTCAGCAGGCAGTCCTCCAAAGATTCCCCCCAATGCCACGCTTGTGTTTGAGGTGGAGT
TGTTTGAGTTTAAGGGAGAAGATCTGACGGAAGAGGAAGATGGCGGAATCATTCGCAGAATACAGACTCGCGGTGAAGGC
TACGCTAAGCCCAATGAGGGCGCTATCGTGGAGGTTGCACTGGAAGGGTACTACAAGGACCAGCTCTTTGACCAGCGGGA
GCTCCGCTTTGAGATTGGCGAGGGGGAGAACCTGGATCTGCCTTATGGTCTGGAGAGGGCCATTCAGCGCATGGAGAAAG
GAGAACATTCCATTGTGTACCTCAAGCCCAGCTATGCTTTTGGCAGTGTTGGGAAGGAAAAGTTCCAAATCCCACCAAAT
GCTGAGCTGAAATATGAATTACACCTCAAGAGTTTTGAAAAGGCCAAGGAGTCTTGGGAGATGAATTCAGAAGAGAAGCT
GGAACAGAGCACCATAGTGAAAGAGCGGGGCACTGTGTACTTCAAGGAAGGTAAATACAAGCAAGCTTTACTACAGTATA
AGAAGATCGTGTCTTGGCTGGAGTATGAGTCTAGTTTTTCCAATGAGGAAGCACAAAAAGCACAGGCCCTTCGACTGGCC
TCTCACCTCAACCTGGCCATGTGTCATCTGAAACTACAGGCCTTCTCTGCTGCCATTGAAAGCTGTAACAAGGCCCTAGA
ACTGGACAGCAACAACGAGAAGGGCCTCTTCCGCCGGGGAGAGGCCCACCTGGCCGTGAATGACTTTGAACTGGCACGGG
CTGATTTCCAGAAGGTCCTGCAGCTCTACCCCAGCAACAAAGCTGCCAAGACCCAGCTGGCTGTGTGCCAGCAGCGGATC
CGAAGGCAGCTTGCCCGGGAGAAGAAGCTCTATGCCAATATGTTTGAGAGGCTGGCTGAGGAGGAGAACAAGGCCAAGGC
AGAGGCTTCCTCGGGAGACCATCCCGCTGACGCAGAGATGAAGGAGGAGCAGAAGAGCAGCACGGCAGGGAGCCAGCCTC
AGGTGGAGACAGAAGCGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 187 .60 RPM
SRP007412_cerebellum 173 .65 RPM
SRP007412_heart 50 .39 RPM
SRP007412_kidney 135 .54 RPM
SRP007412_liver 85 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007605 ortholog_one2one 1 retrogene
retro_btau_561,
Callithrix jacchus ENSCJAG00000018746 ortholog_one2one 1 retrogene
retro_cjac_436,
Dasypus novemcinctus ENSDNOG00000011244 ortholog_one2one 1 retrogene
retro_dnov_894,
Homo sapiens ENSG00000004478 ortholog_one2one 5 retrogenes
retro_hsap_3085, retro_hsap_4162, retro_hsap_4165, retro_hsap_4264, retro_hsap_4266,
Gorilla gorilla ENSGGOG00000010471 ortholog_one2one 4 retrogenes
retro_ggor_2120, retro_ggor_2852, retro_ggor_2854, retro_ggor_2855,
Macaca mulatta ENSMMUG00000007405 ortholog_one2one 1 retrogene
retro_mmul_1969,
Nomascus leucogenys ENSNLEG00000002835 ortholog_one2one 1 retrogene
retro_nleu_2291,
Pongo abelii ENSPPYG00000010852 within_species_paralog 5 retrogenes
retro_pabe_1654, retro_pabe_1686, retro_pabe_2364, retro_pabe_2365, retro_pabe_998,
Pongo abelii ENSPPYG00000012604 within_species_paralog 1 retrogene
retro_pabe_1105,
Pan troglodytes ENSPTRG00000004529 ortholog_one2one 3 retrogenes
retro_ptro_2083, retro_ptro_3000, retro_ptro_3001,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2607 82.59 53.81
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2. retro_pabe_2611 84.85 57.52
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3. retro_pabe_3383 82.72 58.17
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4. retro_pabe_3518 83.91 100.00
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Download FASTA sequences of all ENSPPYG00000004149 retrocopies