Parental gene: | DPPA3, ENSPPYG00000004230 |
| Aliases: | None |
| Description: | developmental pluripotency associated 3 [Source:HGNC Symbol;Acc:19199] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:8054778..8060348(+) |
>ENSPPYG00000004230
ATGGACCCATCACAGAAGTTTAATCCAACCTACATCCCAGAGTCTCCACAAATGCTCACCGAAGAAAATTCCCGGGACGA
TTCAGGGGCCTCTCAAATCTGCTCCGAGACATTGATAAAGCACCTTAGTAACTTGACTATCAACGCTAGTAGCCAAACTG
CTTCCCCTCTATCGGAAGCTTTACTCCGTCGACAGTCTGCAAGAGCAGCAGTCCTCAAGGAAATCGAAGATGAGTGGCTT
TACAGCGGGAGAGGAGTAAGAACATTGCTGTCTGTGCAGAGAGAAAAGATGGCAAGATTGAGATACATGTTACTCGGCAG
AGTTCGTACGCATGAAAGAATACCAACAAACAAGGGGCCTAAGGGAGTTAAGAAGGAATCAAGACCATTCAAATGTCCCT
GCAGTTTCTGCGTGTCTAACGGATGGGATCCTTCTGAGAATGCTAGAATAGGGAATCAAGACACCAAGCCACTTCAGCCA
TAA
ATGGACCCATCACAGAAGTTTAATCCAACCTACATCCCAGAGTCTCCACAAATGCTCACCGAAGAAAATTCCCGGGACGA
TTCAGGGGCCTCTCAAATCTGCTCCGAGACATTGATAAAGCACCTTAGTAACTTGACTATCAACGCTAGTAGCCAAACTG
CTTCCCCTCTATCGGAAGCTTTACTCCGTCGACAGTCTGCAAGAGCAGCAGTCCTCAAGGAAATCGAAGATGAGTGGCTT
TACAGCGGGAGAGGAGTAAGAACATTGCTGTCTGTGCAGAGAGAAAAGATGGCAAGATTGAGATACATGTTACTCGGCAG
AGTTCGTACGCATGAAAGAATACCAACAAACAAGGGGCCTAAGGGAGTTAAGAAGGAATCAAGACCATTCAAATGTCCCT
GCAGTTTCTGCGTGTCTAACGGATGGGATCCTTCTGAGAATGCTAGAATAGGGAATCAAGACACCAAGCCACTTCAGCCA
TAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000046609 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000032092 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005409 | ortholog_one2one | 10 retrogenes | |
| Homo sapiens | ENSG00000187569 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013040 | ortholog_one2one | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000017530 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000046323 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000026887 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000024813 | ortholog_one2one | 7 retrogenes | |
| Pan troglodytes | ENSPTRG00000004617 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000022950 | ortholog_one2many | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000751 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_873 | 79.38 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_975 | 78.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1338 | 57.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1962 | 95.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2323 | 59.12 | 96.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_3586 | 50.40 | 76.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000004230 retrocopies