Parental gene: | TARBP2, ENSPPYG00000004583 |
| Aliases: | None |
| Description: | TAR (HIV-1) RNA binding protein 2 [Source:HGNC Symbol;Acc:11569] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:53273875..53279061(+) |
>ENSPPYG00000004583
ATGAGTGAAGAGGAGCAAGGCTCCGGCACTACCACGGGCTGCAGGCTGCCTAGTATAGAGCAAATGCTGGCCGCCAACCC
AGGCAAGACCCCGATCAGCCTTCTGCAGGAGTATGGGACCAGAATAGGGAAGACGCCTGTGTACGACCTTCTCAAAGCCG
AGGGCCAAGCCCACCAGCCTAATTTCACCTTCCGGGTCACCGTTGGCGACACCAGCTGCACTGGTCAGGGCCCCAGCAAG
AAGGCAGCCAAGCACAAGGCAGCTGAGGTGGCCCTCAAACACCTCAAAGGGGGGAGCATGCTGGAGCCGGCCCTGGAGGA
CAGCAGTTCTTTTTCTCCCCTAGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTGCAGCAGCTGCTACCCCAG
TTCCATCTGTTGTCCTAACCGAGCTGGTGGTGCAGAAAGGCTGGCGGTTGCCGGAGTACACAGTGACCCAGGAGTCCGGG
CCAGCCCACCGCAAAGAATTCACCATGACCTGTCGAGTGGAGCATTTCATTGAGATTGGGAGTGGCACTTCCAAAAAATT
GGCAAAGCGGAATGCGGCGGCCAAAATGCTGCTTCGAGTGCACACGGTGCCTCTGGATGCCCGGGATGGCAATGAGGTGG
AGCCTGATGATGACCACTTCTCCATTGGTGTGGGCTCCCGCCTGGATGGTCTTCGAAACCGGGGCCCAGGTTGCACCTGG
GATTCTCTACGAAATTCAGTAGGAGAGAAGATCCTGTCCCTCCGCAGTTGCTCCCTGGGCTCCCTGGGTGCCCTGGGCCC
TGCCTGCTGCCGTGTCCTCAGTGAGCTCTCTGAGGAGCAGGCCTTTCACGTCAGCTACCTGGATATTGAGGAGCTGAGCC
TGAGTGGACTCTGCCAGTGCCTGGTGGAACTGTCCACCCAGCCGGCCACTGTGTGTCATGGTTCTGCAACCACTAGGGAG
GCAGCCCGTGGTGAGGCTGCCCGCCGTGCCCTGCAGTACCTCAAGATCATGGCAGGCAGCAAGTGA
ATGAGTGAAGAGGAGCAAGGCTCCGGCACTACCACGGGCTGCAGGCTGCCTAGTATAGAGCAAATGCTGGCCGCCAACCC
AGGCAAGACCCCGATCAGCCTTCTGCAGGAGTATGGGACCAGAATAGGGAAGACGCCTGTGTACGACCTTCTCAAAGCCG
AGGGCCAAGCCCACCAGCCTAATTTCACCTTCCGGGTCACCGTTGGCGACACCAGCTGCACTGGTCAGGGCCCCAGCAAG
AAGGCAGCCAAGCACAAGGCAGCTGAGGTGGCCCTCAAACACCTCAAAGGGGGGAGCATGCTGGAGCCGGCCCTGGAGGA
CAGCAGTTCTTTTTCTCCCCTAGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTGCAGCAGCTGCTACCCCAG
TTCCATCTGTTGTCCTAACCGAGCTGGTGGTGCAGAAAGGCTGGCGGTTGCCGGAGTACACAGTGACCCAGGAGTCCGGG
CCAGCCCACCGCAAAGAATTCACCATGACCTGTCGAGTGGAGCATTTCATTGAGATTGGGAGTGGCACTTCCAAAAAATT
GGCAAAGCGGAATGCGGCGGCCAAAATGCTGCTTCGAGTGCACACGGTGCCTCTGGATGCCCGGGATGGCAATGAGGTGG
AGCCTGATGATGACCACTTCTCCATTGGTGTGGGCTCCCGCCTGGATGGTCTTCGAAACCGGGGCCCAGGTTGCACCTGG
GATTCTCTACGAAATTCAGTAGGAGAGAAGATCCTGTCCCTCCGCAGTTGCTCCCTGGGCTCCCTGGGTGCCCTGGGCCC
TGCCTGCTGCCGTGTCCTCAGTGAGCTCTCTGAGGAGCAGGCCTTTCACGTCAGCTACCTGGATATTGAGGAGCTGAGCC
TGAGTGGACTCTGCCAGTGCCTGGTGGAACTGTCCACCCAGCCGGCCACTGTGTGTCATGGTTCTGCAACCACTAGGGAG
GCAGCCCGTGGTGAGGCTGCCCGCCGTGCCCTGCAGTACCTCAAGATCATGGCAGGCAGCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .57 RPM |
| SRP007412_cerebellum | 10 .34 RPM |
| SRP007412_heart | 2 .74 RPM |
| SRP007412_kidney | 12 .50 RPM |
| SRP007412_liver | 6 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018668 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000139546 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012637 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023051 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017690 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005020 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3281 | 76.08 | 61.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000004583 retrocopies