Parental gene:

TARBP2, ENSPPYG00000004583

Aliases:None
Description:TAR (HIV-1) RNA binding protein 2 [Source:HGNC Symbol;Acc:11569]
Organism:Orangutan (Pongo abelii)
Coordinates:12:53273875..53279061(+)


>ENSPPYG00000004583
ATGAGTGAAGAGGAGCAAGGCTCCGGCACTACCACGGGCTGCAGGCTGCCTAGTATAGAGCAAATGCTGGCCGCCAACCC
AGGCAAGACCCCGATCAGCCTTCTGCAGGAGTATGGGACCAGAATAGGGAAGACGCCTGTGTACGACCTTCTCAAAGCCG
AGGGCCAAGCCCACCAGCCTAATTTCACCTTCCGGGTCACCGTTGGCGACACCAGCTGCACTGGTCAGGGCCCCAGCAAG
AAGGCAGCCAAGCACAAGGCAGCTGAGGTGGCCCTCAAACACCTCAAAGGGGGGAGCATGCTGGAGCCGGCCCTGGAGGA
CAGCAGTTCTTTTTCTCCCCTAGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTGCAGCAGCTGCTACCCCAG
TTCCATCTGTTGTCCTAACCGAGCTGGTGGTGCAGAAAGGCTGGCGGTTGCCGGAGTACACAGTGACCCAGGAGTCCGGG
CCAGCCCACCGCAAAGAATTCACCATGACCTGTCGAGTGGAGCATTTCATTGAGATTGGGAGTGGCACTTCCAAAAAATT
GGCAAAGCGGAATGCGGCGGCCAAAATGCTGCTTCGAGTGCACACGGTGCCTCTGGATGCCCGGGATGGCAATGAGGTGG
AGCCTGATGATGACCACTTCTCCATTGGTGTGGGCTCCCGCCTGGATGGTCTTCGAAACCGGGGCCCAGGTTGCACCTGG
GATTCTCTACGAAATTCAGTAGGAGAGAAGATCCTGTCCCTCCGCAGTTGCTCCCTGGGCTCCCTGGGTGCCCTGGGCCC
TGCCTGCTGCCGTGTCCTCAGTGAGCTCTCTGAGGAGCAGGCCTTTCACGTCAGCTACCTGGATATTGAGGAGCTGAGCC
TGAGTGGACTCTGCCAGTGCCTGGTGGAACTGTCCACCCAGCCGGCCACTGTGTGTCATGGTTCTGCAACCACTAGGGAG
GCAGCCCGTGGTGAGGCTGCCCGCCGTGCCCTGCAGTACCTCAAGATCATGGCAGGCAGCAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .57 RPM
SRP007412_cerebellum 10 .34 RPM
SRP007412_heart 2 .74 RPM
SRP007412_kidney 12 .50 RPM
SRP007412_liver 6 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018668 ortholog_one2one 1 retrogene
retro_cjac_1526,
Homo sapiens ENSG00000139546 ortholog_one2one 1 retrogene
retro_hsap_3995,
Gorilla gorilla ENSGGOG00000012637 ortholog_one2one 1 retrogene
retro_ggor_2682,
Mus musculus ENSMUSG00000023051 ortholog_one2one 1 retrogene
retro_mmus_2820,
Nomascus leucogenys ENSNLEG00000017690 ortholog_one2one 1 retrogene
retro_nleu_545,
Pan troglodytes ENSPTRG00000005020 ortholog_one2one 1 retrogene
retro_ptro_2712,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3281 76.08 61.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000004583 retrocopies