Parental gene: | DENR, ENSPPYG00000005073 |
| Aliases: | None |
| Description: | density-regulated protein [Source:HGNC Symbol;Acc:2769] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:125106430..125120107(+) |
>ENSPPYG00000005073
ATGGCAGCTGACATTTCTGAATCCAGCGGGGCTGACTGCAAAGGAGACCCAAGGAACAGTGCCAAGTTAGATGCCGATTA
CCCACTTCGAGTCCTTTATTGTGGAGGCAAGTGTTCTTTCCCAACCTGGTACTGTGAATATATGCCTGATGTTGCTAAAT
GTAGACAATGGTTAGAGAAGAATTTTCCAAATGAATTTGCAAAACTTACTGTAGAAAATTCACCCAAACAAGAAGCTGGA
ATTAGTGAGGGTCAAGGAACAGCAGGGGAAGAAGAGGAGAAGAAAAAACAGAAGAGAGGTGGAAGGGGTCAAATAAAACA
AAAAAAGAAGACCGTACCACAGAAGGTTACTATAGCCAAAATTCCCAGAGCAAAGAAGAAATATGTGACAAGAGTATGTG
GCCTTGCAACTTTCGGCATGGTGGCAAAAGGTTGCAAAATGGCTCATCCCCTCTGGGAATGA
ATGGCAGCTGACATTTCTGAATCCAGCGGGGCTGACTGCAAAGGAGACCCAAGGAACAGTGCCAAGTTAGATGCCGATTA
CCCACTTCGAGTCCTTTATTGTGGAGGCAAGTGTTCTTTCCCAACCTGGTACTGTGAATATATGCCTGATGTTGCTAAAT
GTAGACAATGGTTAGAGAAGAATTTTCCAAATGAATTTGCAAAACTTACTGTAGAAAATTCACCCAAACAAGAAGCTGGA
ATTAGTGAGGGTCAAGGAACAGCAGGGGAAGAAGAGGAGAAGAAAAAACAGAAGAGAGGTGGAAGGGGTCAAATAAAACA
AAAAAAGAAGACCGTACCACAGAAGGTTACTATAGCCAAAATTCCCAGAGCAAAGAAGAAATATGTGACAAGAGTATGTG
GCCTTGCAACTTTCGGCATGGTGGCAAAAGGTTGCAAAATGGCTCATCCCCTCTGGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 10 .06 RPM |
| SRP007412_cerebellum | 4 .26 RPM |
| SRP007412_heart | 3 .49 RPM |
| SRP007412_kidney | 4 .61 RPM |
| SRP007412_liver | 3 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000016012 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000032433 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020488 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000139726 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005562 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002186 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008150 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000015974 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000005584 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_861 | 85.71 | 95.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1821 | 85.88 | 55.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3509 | 77.92 | 50.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000005073 retrocopies