Parental gene:

OLA1, ENSPPYG00000012943

Aliases:None
Description:obg-like ATPase 1 [Source:RefSeq peptide;Acc:NP_001127505]
Organism:Orangutan (Pongo abelii)
Coordinates:2b:64158550..64335697(-)


>ENSPPYG00000012943
ATGCCCCCTAAAAAGGGAGGTGATGGAATTAAACCACCCCCAATCATTGGAAGATTTGGAACCTCACTGAAAATTGGTAT
TGTTGGATTGCCAAATGTTGGGAAATCTACTTTCTTCAATGTACTAACCAATAGTCAGGCTTCAGCAGAAAACTTCCCAT
TCTGCACTATTGATCCTAATGAGAGCAGAGTACCTGTGCCAGATGAAAGGTTTGACTTTCTTTGTCAATACCACAAACCA
GCAAGCAAAATTCCTGCCTTTCTAAATGTGGTGGATATTGCTGGCCTTGTGAAAGGAGCTCACAATGGGCAGGGCCTGGG
GAATGCTTTTTTATCTCATATTAGTGCCTGTGATGGCATCTTTCATCTAACACGTGCTTTTGAAGATGATGATATCACGC
ATGTTGAAGGAAGTGTAGATCCTATTCGAGATATAGAAATAATACATGAAGAGCTTCAGCTTAAAGATGAGGAAATGATT
GGGCCCATTATAGATAAACTAGAAAAGGTGGCTGTGAGAGGAGGAGATAAAAAACTAAAACCTGAATATGATATAATGTG
CAAAGTAAAATCCTGGGTTATAGATCAAAAGAAACCTGTTCGCTTCTATCATGATTGGAATGACAAAGAGATTGAAGTGT
TGAATAAACACTTATTTTTGACTTCAAAACCAATGGTCTACTTGGTTAATCTTTCTGAAAAAGACTACATTAGAAAGAAA
AACAAATGGTTGATAAAAATTAAAGAGTGGGTGGACAAGTATGACCCAGGTGCTTTGGTCATTCCTTTTAGTGGGGCCTT
GGAACTCAAGTTGCAAGAATTGAGTGCTGAGGAGAGACAGAAGTATCTGGAAGCGAACATGACACAAAGTGCTTTGCCAA
AGATCATTAAGGCTGGGTTTGCAGCACTCCAACTAGAATACTTTTTCACTGCAGGCCCAGAGGAAGTGCGTGCATGGACC
ATCAGGAAAGGGACTAAGGCTCCTCAGGCTGCAGGAAAGATTCACACAGATTTTGAAAAGGGATTCATTATGGCTGAAGT
AATGAAATATGAAGATTTTAAAGAGGAAGGTTCTGAAAATGCAGTCAAGGCTGCTGGAAAGTACAGACAACAAGGCAGAA
ATTATATTGTTGAAGATGGAGATATTATCTTCTTCAAATTTAACACACCTCAACAACCAAAGAAGAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 44 .12 RPM
SRP007412_cerebellum 42 .80 RPM
SRP007412_heart 20 .32 RPM
SRP007412_kidney 32 .52 RPM
SRP007412_liver 20 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006970 ortholog_one2one 1 retrogene
retro_btau_1737,
Choloepus hoffmanni ENSCHOG00000005044 ortholog_one2one 1 retrogene
retro_chof_1295,
Callithrix jacchus ENSCJAG00000007877 ortholog_one2one 1 retrogene
retro_cjac_2875,
Dipodomys ordii ENSDORG00000008681 ortholog_one2one 1 retrogene
retro_dord_556,
Homo sapiens ENSG00000138430 ortholog_one2one 1 retrogene
retro_hsap_2593,
Gorilla gorilla ENSGGOG00000022215 ortholog_one2one 1 retrogene
retro_ggor_1623,
Myotis lucifugus ENSMLUG00000025196 possible_ortholog 1 retrogene
retro_mluc_626,
Monodelphis domestica ENSMODG00000009296 ortholog_one2one 1 retrogene
retro_mdom_1428,
Nomascus leucogenys ENSNLEG00000005817 ortholog_one2one 1 retrogene
retro_nleu_1526,
Otolemur garnettii ENSOGAG00000016557 ortholog_one2one 1 retrogene
retro_ogar_1697,
Pan troglodytes ENSPTRG00000012650 ortholog_one2one 1 retrogene
retro_ptro_1517,
Sorex araneus ENSSARG00000010743 ortholog_one2one 1 retrogene
retro_sara_545,
Tarsius syrichta ENSTSYG00000005517 ortholog_one2one 2 retrogenes
retro_tsyr_1845, retro_tsyr_394,
Vicugna pacos ENSVPAG00000009660 ortholog_one2one 2 retrogenes
retro_vpac_52, retro_vpac_613,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_928 68.37 53.54
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2. retro_pabe_1912 92.41 59.34
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Download FASTA sequences of all ENSPPYG00000012943 retrocopies