Parental gene: | LETM1, ENSPPYG00000014533 |
| Aliases: | None |
| Description: | leucine zipper-EF-hand containing transmembrane protein 1 [Source:HGNC Symbol;Acc:6556] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 4:1808706..1848384(-) |
>ENSPPYG00000014533
ATGGCGTCCATCTTACTGAGGAGCTGCCGCGGCCGGGCGCCGGCCCGTCTCCCGCCGCCGCCTCGGGTCACCGTCCCGCG
GGGTAGTCCGGGGGATCCGGCTCATCTCAGCTGTGCCAACACCCTGGGGTTGAGGAGCTGCCTGAATGTTCCATTTGGCT
GCTGCACTCCCATCCACCCTGTGTACCCATCCTCCAGAGGCGATCACCTTGGCTGTTGGACTCTGAGGCCCGAGTGCCTT
CGCACGGTGTCGAGAGCGCCATGGACCTCTACCTCTGTGGGTTTTGTGGCTGTGGGACCTCAGTGCCTTCCTGTGCGTGG
CTGGCACTCTTCGCGCCCTGTTCGCGATGACTCGGTAGTAGAGAAGTCCCTCAAGTCCTTGAAGGACAAGAACAAGAAGC
TGGAGGAAGGCGGCCCGGTGTACAGCCCCCCCGCAGCGGTGGTGGTGAAGAAGCCTCTGGGGCAGAGGGTGCTGGACGAG
CTGAAGCACTACTACCACGGCTTCCGCCTGCTGTGGATTGACGCCAAGATCGCCGCACGCACGCTCTGGCGCATCCTCAA
TGGCCACACCCTCACCCGCCGGGAGCGCAGGCAGTTTCTCCGGATCTGCGCTGACCTCTTCCGCCTGGTGCCATTCCTTG
TGTTCGTGGTGGTGCCGTTCATGGAGTTTCTGCTGCCTGTTGCTGTGAAGCTCTTCCCCAACATGTTGCCATCCACATTT
GAGACTCAGTCACTCAAGGAGGAGAGGCTGAAGAAGGAGCTTCGGGTCAAGCTGGAGCTGGCCAAGTTCCTCCAGGACAC
CATCGAGGAGATGGCCTTGAAGAACAAGGCAGCCAAGGGCAGCGCCACCAAAGACTTCTCTGTGTTTTTCCAGAAGATCC
GGGAGACAGGGGAGAGGCCCAGCAATGAGGAAATCATGCGTTTTTCCAAATTATTTGAGGATGAGCTGACCCTGGACAAC
CTGACACGGCCGCAGCTGGTGGCCCTGTGCAAGCTGCTGGAGCTACAGTCCATCGGCACCAACAACTTCCTGCGCTTCCA
GCTTACCATGCGGCTGCGCTCCATAAAGGCAGACGACAAGCTGATTGCTGAGGAAGGGGTGGACAGCCTGAGCGTCAAGG
AGCTGCAGGCAGCATGTCGGGCACGAGGCATGCGGGCCCTGGGCGTCACGGAAGACCGCCTGAGGGGTCAGCTGAAGCAG
TGGCTGGACCTGCACTTGCATCAGGAGATCCCCACATCGCTGCTCATCCTGTCCCGGGCCATGTACCTCCCGGACACCCT
CTCTCCAGCTGACCAGCTCAAGTCCACACTGCAGACCCTCCCAGAGATTGTGGCAAAGGAAGCGCAGGTAAAAGCGGCCG
AGGTGGAGGGCGAGCAGGTGGACAACAAGGCCAAGCTGGAGGCCACGCTGCAGGAGGAGGCGGCCATCCAGCAGGAACAC
CGTGAGAAGGAGCTGCAGAAGCGCTCAGAGGCGGCGAAGGATGTTGAGCCCGAACGTGTGGTAGCTGCTCCCCAAAGGCC
AGGAACCGAGCCACAGCCAGAAATGCCTGACACAGTCCTGCAGTCAGAGACCTTGAAGGACACTGCCCCCGTGCTGGAGG
GCTTGAAGGAGGAAGAGATCACGAAGGAGGAAATCGACATCCTCAGCGATGCCTGCTCTAAGCTGCAGGAGCAGAAGAAG
TCACTCACCAAGGAGAAGGAGGAGCTGGAGCTGCTGAAGGAGGACGTGCAGGACTACAGCGAGGACTTGCAGGAGATTAA
GAAGGAACTTTCAAAGACTGGTGAAGAAAAATACGTGGAAGAATCTAAAGCCAGCAAGAGATTGACAAAAAGGGTGCAGC
AGATGATCGGGCAGATCGATGGCTTGATCTCGCAGCTGGAGATGGACCAGCAGGCTGGCAAGCTGGCCCCGGCCAACGGC
ATGCCCACAGGGGAGAACATCATCAGTGTTGCTGAGCTCATCAACGCCATGAAGCAAGTCAAGCACATTCCCGAAAGCAA
GCTCACCAGCCTGGCCGCAGCACTGGATGAAAACAAGGACGGCAAGGTCAACATCAATGACCTCGTCAAGGTGATTGAGC
TGGTGGACAAAGAAGATGTTCACATCTCCACCAGCCAGGTGGCTGAGATTGTAGCAACACTGGAAAAAGAGGAGAAGGTG
GAGGAGAAGGAGAAGGCCAAAGAGAAGGCAGAGAAGGAGGTCGCAGAGGTGAAGAGCTAG
ATGGCGTCCATCTTACTGAGGAGCTGCCGCGGCCGGGCGCCGGCCCGTCTCCCGCCGCCGCCTCGGGTCACCGTCCCGCG
GGGTAGTCCGGGGGATCCGGCTCATCTCAGCTGTGCCAACACCCTGGGGTTGAGGAGCTGCCTGAATGTTCCATTTGGCT
GCTGCACTCCCATCCACCCTGTGTACCCATCCTCCAGAGGCGATCACCTTGGCTGTTGGACTCTGAGGCCCGAGTGCCTT
CGCACGGTGTCGAGAGCGCCATGGACCTCTACCTCTGTGGGTTTTGTGGCTGTGGGACCTCAGTGCCTTCCTGTGCGTGG
CTGGCACTCTTCGCGCCCTGTTCGCGATGACTCGGTAGTAGAGAAGTCCCTCAAGTCCTTGAAGGACAAGAACAAGAAGC
TGGAGGAAGGCGGCCCGGTGTACAGCCCCCCCGCAGCGGTGGTGGTGAAGAAGCCTCTGGGGCAGAGGGTGCTGGACGAG
CTGAAGCACTACTACCACGGCTTCCGCCTGCTGTGGATTGACGCCAAGATCGCCGCACGCACGCTCTGGCGCATCCTCAA
TGGCCACACCCTCACCCGCCGGGAGCGCAGGCAGTTTCTCCGGATCTGCGCTGACCTCTTCCGCCTGGTGCCATTCCTTG
TGTTCGTGGTGGTGCCGTTCATGGAGTTTCTGCTGCCTGTTGCTGTGAAGCTCTTCCCCAACATGTTGCCATCCACATTT
GAGACTCAGTCACTCAAGGAGGAGAGGCTGAAGAAGGAGCTTCGGGTCAAGCTGGAGCTGGCCAAGTTCCTCCAGGACAC
CATCGAGGAGATGGCCTTGAAGAACAAGGCAGCCAAGGGCAGCGCCACCAAAGACTTCTCTGTGTTTTTCCAGAAGATCC
GGGAGACAGGGGAGAGGCCCAGCAATGAGGAAATCATGCGTTTTTCCAAATTATTTGAGGATGAGCTGACCCTGGACAAC
CTGACACGGCCGCAGCTGGTGGCCCTGTGCAAGCTGCTGGAGCTACAGTCCATCGGCACCAACAACTTCCTGCGCTTCCA
GCTTACCATGCGGCTGCGCTCCATAAAGGCAGACGACAAGCTGATTGCTGAGGAAGGGGTGGACAGCCTGAGCGTCAAGG
AGCTGCAGGCAGCATGTCGGGCACGAGGCATGCGGGCCCTGGGCGTCACGGAAGACCGCCTGAGGGGTCAGCTGAAGCAG
TGGCTGGACCTGCACTTGCATCAGGAGATCCCCACATCGCTGCTCATCCTGTCCCGGGCCATGTACCTCCCGGACACCCT
CTCTCCAGCTGACCAGCTCAAGTCCACACTGCAGACCCTCCCAGAGATTGTGGCAAAGGAAGCGCAGGTAAAAGCGGCCG
AGGTGGAGGGCGAGCAGGTGGACAACAAGGCCAAGCTGGAGGCCACGCTGCAGGAGGAGGCGGCCATCCAGCAGGAACAC
CGTGAGAAGGAGCTGCAGAAGCGCTCAGAGGCGGCGAAGGATGTTGAGCCCGAACGTGTGGTAGCTGCTCCCCAAAGGCC
AGGAACCGAGCCACAGCCAGAAATGCCTGACACAGTCCTGCAGTCAGAGACCTTGAAGGACACTGCCCCCGTGCTGGAGG
GCTTGAAGGAGGAAGAGATCACGAAGGAGGAAATCGACATCCTCAGCGATGCCTGCTCTAAGCTGCAGGAGCAGAAGAAG
TCACTCACCAAGGAGAAGGAGGAGCTGGAGCTGCTGAAGGAGGACGTGCAGGACTACAGCGAGGACTTGCAGGAGATTAA
GAAGGAACTTTCAAAGACTGGTGAAGAAAAATACGTGGAAGAATCTAAAGCCAGCAAGAGATTGACAAAAAGGGTGCAGC
AGATGATCGGGCAGATCGATGGCTTGATCTCGCAGCTGGAGATGGACCAGCAGGCTGGCAAGCTGGCCCCGGCCAACGGC
ATGCCCACAGGGGAGAACATCATCAGTGTTGCTGAGCTCATCAACGCCATGAAGCAAGTCAAGCACATTCCCGAAAGCAA
GCTCACCAGCCTGGCCGCAGCACTGGATGAAAACAAGGACGGCAAGGTCAACATCAATGACCTCGTCAAGGTGATTGAGC
TGGTGGACAAAGAAGATGTTCACATCTCCACCAGCCAGGTGGCTGAGATTGTAGCAACACTGGAAAAAGAGGAGAAGGTG
GAGGAGAAGGAGAAGGCCAAAGAGAAGGCAGAGAAGGAGGTCGCAGAGGTGAAGAGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 34 .17 RPM |
| SRP007412_cerebellum | 25 .05 RPM |
| SRP007412_heart | 8 .46 RPM |
| SRP007412_kidney | 18 .46 RPM |
| SRP007412_liver | 9 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001859 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000168924 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002923 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000067 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014883 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014167 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1655 | 83.00 | 53.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000014533 retrocopies