Parental gene:

NDFIP1, ENSPPYG00000015896

Aliases:None
Description:Nedd4 family interacting protein 1 [Source:HGNC Symbol;Acc:17592]
Organism:Orangutan (Pongo abelii)
Coordinates:5:143644459..143690061(+)


>ENSPPYG00000015896
ATGGCGTTGGCGTTGGCGGCGCTGGCGGCGGTCGAGCCGGCCTGCGGCAGCCGGTACCAGCAGTTGCAGAATGAAGAAGA
GTCTGGAGAACCTGAACAGGCTGCAGGTGATGCTCCTCCACCTTACAGCAGCATTTCTGCAGAGAGCGCAGCATATTTTG
ACTACAAGGATGAGTCTGGGTTTCCAAAGCCCCCATCTTACAATGTAGCTACAACACTGCCCAGTTATGATGAAGCGGAG
AGGACCAAGGCTGAAGCTACTATCCCTTTGGTTCCTGGGAGAGATGAGGATTTTGTGGGTCGGGATGATTTTGATGATGC
TGACCAGCTGAGGATAGGAAATGATGGGATTTTCATGTTAACTTTTTTCATGGCATTCCTCTTTAACTGGATTGGGTTTT
TCCTGTCTTTTTGCCTGACCACTTCAGCTGCAGGAAGGTATGGGGCCATTTCAGGATTTGGTCTCTCTCTAATTAAATGG
ATCCTGATTGTCAGGTTTTCCACCTATTTCCCTGGATATTTTGATGGTCAGTACTGGCTCTGGTGGGTGTTCCTTGTTTT
AGGCTTTCTCCTGTTTCTCAGAGGATTTATCAATTATGCAAAAGTTCGGAAGATGCCAGAAACTTTCTCAAATCTCCCCA
GGACCAGAGTTCTCTTTATTTATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 236 .87 RPM
SRP007412_cerebellum 179 .60 RPM
SRP007412_heart 40 .16 RPM
SRP007412_kidney 94 .07 RPM
SRP007412_liver 66 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000047747 ortholog_one2one 1 retrogene
retro_btau_766,
Callithrix jacchus ENSCJAG00000018271 ortholog_one2one 1 retrogene
retro_cjac_3175,
Equus caballus ENSECAG00000021907 ortholog_one2one 1 retrogene
retro_ecab_261,
Homo sapiens ENSG00000131507 ortholog_one2one 1 retrogene
retro_hsap_1091,
Gorilla gorilla ENSGGOG00000004879 ortholog_one2one 1 retrogene
retro_ggor_859,
Macaca mulatta ENSMMUG00000016787 ortholog_one2one 1 retrogene
retro_mmul_846,
Pan troglodytes ENSPTRG00000017358 ortholog_one2one 1 retrogene
retro_ptro_743,
Sarcophilus harrisii ENSSHAG00000002466 ortholog_one2one 1 retrogene
retro_shar_738,
Sus scrofa ENSSSCG00000025295 ortholog_one2many 1 retrogene
retro_sscr_301,
Ictidomys tridecemlineatus ENSSTOG00000005153 ortholog_one2one 1 retrogene
retro_itri_1454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_908 66.37 50.23
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Download FASTA sequences of all ENSPPYG00000015896 retrocopies