Parental gene:

E2F3, ENSPPYG00000016269

Aliases:None
Description:E2F transcription factor 3 [Source:HGNC Symbol;Acc:3115]
Organism:Orangutan (Pongo abelii)
Coordinates:6:21160425..21251806(+)


>ENSPPYG00000016269
ATGAGAAAGGGGATCCAGCCCGCTCTGGAGCAGTACCTGGTGACCGCCGGGGGTGGGGAGGGGATCCTCACCACGAACAC
TTCCACCACCTCCTGTTCCTCCTCCCTCCAAAGCGGCGCCGTAGCCGCCGGCCCCCTCCTCCCCAGTGCCCCCGGCGCGG
AGCAGACCGCCGGCAGCCTCCTCTACACCACGCCGCACGGACCCTCCAGCAGAGCCGGGCTGCTGCAGCAGCCACCAGCG
CTGGGACGCGGCGGCAGCGGCGGCGGCGGCGGCCCTCCGGCAAAGCGAAGGCTGGAGCTAGGAGAAAGCGGTCATCAGTA
CCTCTCAGATGGTTTAAAAACCCCCAAGGGCAAAGGAAGAGCTGCACTACGAAGTCCAGATAGTCCAAAAACTCCAAAAT
CTCCCTCAGAAAAAACGCGGTATGATACGTCTCTTGGTCTGCTCACCAAGAAGTTCATTCAGCTCCTGAGCCAGTCACCC
GATGGGGTCTTGGATTTGAACAAGGCAGCAGAAGTGCTAAAAGTGCAAAAGAGAAGGATTTATGATATCACCAACGTTCT
GGAAGGCATCCACCTCATTAAGAAGAAGTCTAAAAACAACGTCCAATGGATGGGCTGCAGTCTGTCTGAGGATGGGGGCA
TGCTGGCCCAGTGTCAAGGCCTGTCAAAAGAAGTGACCGAGCTCAGTCAGGAAGAGAAGAAATTAGATGAACTGATCCAA
AGCTGCACCCTGGACCTCAAACTGTTAACCGAGGATTCAGAGAATCAAAGGTTAGCTTATGTTACATATCAAGATATTCG
AAAAATTAGTGGCCTTAAAGACCAAACTGTTATAGTTGTGAAAGCCCCTCCAGAAACAAGACTTGAAGTGCCTGACTCAA
TAGAGAGCCTACAAATACATTTGGCAAGTACCCAAGGGCCCATTGAGGTTTACTTATGTCCAGAAGAGACTGAAACACAC
AGTCCAATGAAAACAAACAACCAAGACCACAATGGGAATATCCCTAAACCCGCTTCCAAAGACTTGGCTTCAACCAACTC
AGGACATAGCGATTGCTCAATTTCTATGGGAAATCTTTCTCCTCTGGCCTCCCCAGCCAACCTCTTACAGCAGACTGAGG
ACCAAATTCCTTCCAACCTAGAAGGACCGTTTGTGAACTTACTGCCTCCCCTGCTGCAAGAGGACTATCTCCTGAGCCTC
GGGGAGGAGGAAGGCATCAGCGATCTCTTTGACGCTTACGATTTGGAAAAGCTCCCACTGGTGGAAGACTTCATGTGTAG
TTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .26 RPM
SRP007412_cerebellum 1 .70 RPM
SRP007412_heart 1 .66 RPM
SRP007412_kidney 2 .65 RPM
SRP007412_liver 1 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021045 ortholog_one2one 1 retrogene
retro_btau_1523,
Choloepus hoffmanni ENSCHOG00000008679 ortholog_one2one 2 retrogenes
retro_chof_416, retro_chof_871,
Homo sapiens ENSG00000112242 ortholog_one2one 1 retrogene
retro_hsap_1749,
Gorilla gorilla ENSGGOG00000011022 ortholog_one2one 2 retrogenes
retro_ggor_1796, retro_ggor_2254,
Macaca mulatta ENSMMUG00000017649 ortholog_one2one 1 retrogene
retro_mmul_955,
Pongo abelii ENSPPYG00000012646 within_species_paralog 1 retrogene
retro_pabe_1,
Pan troglodytes ENSPTRG00000023584 ortholog_one2one 2 retrogenes
retro_ptro_1217, retro_ptro_1731,
Tupaia belangeri ENSTBEG00000000171 ortholog_one2one 1 retrogene
retro_tbel_4457,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1447 84.11 95.08
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2. retro_pabe_2137 84.30 51.76
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Download FASTA sequences of all ENSPPYG00000016269 retrocopies