Parental gene:

E2F6, ENSPPYG00000012646

Aliases:None
Description:E2F transcription factor 6 [Source:HGNC Symbol;Acc:3120]
Organism:Orangutan (Pongo abelii)
Coordinates:2a:101195641..101216366(+)


>ENSPPYG00000012646
ATGAGTCAGCAGCGGCCGGCGAGGAAGTTACCCAGTCTCCTCCTGGACCCGACGGAGGAGACAGTTCGCCGTCGGTGCCG
AGACCCCATCAACGTGGAGGGCCTGCTGCCATCAAAAATAAGGATTAATTTAGAAGATAATGTACAATATGTGTCCATGA
GAAAAGCTCTAAAAGTGAAGAGACCTCGTTTTGATGTATCACTGGTTTATTTAACTCGAAAATTTATGGATCTTGTCAGA
TCTGCTCCTGGGGGTATTCTTGACTTAAACAAGGTTGCAACGAAACTGGGAGTCCGAAAGCGGAGAGTGTATGACATCAC
CAATGTCTTAGATGGAATCGACCTCGTTGAGAAGAAATCCAAGAACCATATTCGATGGATAGGATCTGATCTTAGCAATT
TTGGAGCAGTTCCCCAACAAAAGAAGCTACAGGAGGAACTTTCTGACTTATCAGCAATGGAAGATGCTTTGGATGAGTTA
ATTAAGGATTGTGCTCAGCAGCTGTTTGAGTTAACAGATGACAAAGAAAATGAAAGGCTAGCATATGACTCTATCACAGT
GCACATAAGGAGCACCAATGGACCTATCGATGTCTATTTGTGTGAAGTGGAGCAGGGTCAGACCAGTAACAAAAGGTCTG
AAGGTGTCGGGACTTCTTCATCTGAGAGCACTCATCCAGAAGGCCCTGAGGAAGAAAAAAATCCTCAGCAAAGTGAAGAA
TTGCTTGAAGTAAGCAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .42 RPM
SRP007412_cerebellum 4 .38 RPM
SRP007412_heart 3 .85 RPM
SRP007412_kidney 2 .75 RPM
SRP007412_liver 2 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000048286 ortholog_one2one 1 retrogene
retro_btau_1820,
Callithrix jacchus ENSCJAG00000006910 ortholog_one2one 1 retrogene
retro_cjac_178,
Dasypus novemcinctus ENSDNOG00000000258 ortholog_one2one 1 retrogene
retro_dnov_187,
Homo sapiens ENSG00000169016 ortholog_one2one 4 retrogenes
retro_hsap_2542, retro_hsap_2547, retro_hsap_2572, retro_hsap_4906,
Macropus eugenii ENSMEUG00000007957 ortholog_one2many 4 retrogenes
retro_meug_1169, retro_meug_860, retro_meug_882, retro_meug_893,
Myotis lucifugus ENSMLUG00000003384 ortholog_one2many 1 retrogene
retro_mluc_864,
Macaca mulatta ENSMMUG00000023225 ortholog_one2one 1 retrogene
retro_mmul_87,
Nomascus leucogenys ENSNLEG00000014134 ortholog_one2one 1 retrogene
retro_nleu_2351,
Pongo abelii ENSPPYG00000016269 within_species_paralog 2 retrogenes
retro_pabe_1447, retro_pabe_2137,
Pan troglodytes ENSPTRG00000011661 ortholog_one2one 2 retrogenes
retro_ptro_1484, retro_ptro_3272,
Ictidomys tridecemlineatus ENSSTOG00000003316 ortholog_one2one 1 retrogene
retro_itri_135,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1 57.69 73.98
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Download FASTA sequences of all ENSPPYG00000012646 retrocopies