Parental gene: | E2F3, ENSPTRG00000023584 |
| Aliases: | None |
| Description: | E2F transcription factor 3 [Source:HGNC Symbol;Acc:3115] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 6:20595809..20685586(+) |
>ENSPTRG00000023584
ATGCCCTTACAGCAGCAGGCAAAGCGAAGGCTGGAGCTAGGAGAAAGCGGTCATCAGTACCTCTCAGATGGTTTAAAAAC
CCCCAAGGGCAAAGGAAGAGCTGCACTACGAAGTCCAGATAGTCCAAAAAAAAAAACGCGGTATGATACGTCTCTTGGTC
TGCTCACCAAGAAGTTCATTCAGCTCCTGAGCCAGTCACCCGATGGGGTATTGGATTTGAACAAGGCAGCAGAAGTGCTA
AAAGTGCAAAAGAGAAGGATTTATGATATCACCAACGTTCTGGAAGGCATCCACCTCATTAAGAAGAAGTCTAAAAACAA
CGTCCAATGGATGGGCTGCAGTCTGTCTGAGGATGGGGGCATGCTGGCCCAGTGTCAAGGCCTGTCAAAAGAAGTGACCG
AGCTCAGTCAGGAAGAGAAGAAATTAGATGAACTGATCCAAAGCTGCACCCTGGACCTCAAACTGTTAACCGAGGATTCA
GAGAATCAAAGGTTAGCTTATGTTACATATCAAGATATTCGAAAAATTAGTGGCCTTAAAGACCAAACTGTTATAGTTGT
GAAAGCCCCTCCAGAAACAAGACTTGAAGTGCCTGACTCAATAGAGAGCCTACAAATACATTTGGCAAGTACCCAAGGGC
CCATTGAGGTTTACTTATGTCCAGAAGAGACTGAAACACACAGTCCAATGAAAACAAACAACCAAGACCACAATGGGAAT
ATCCCTAAACCCGCTTCCAAAGACTTGGCTTCAACCAACTCAGGACATAGCGATTGCTCAATTTCTATGGGAAACCTTTC
TCCTCTGGCCTCCCCAGCCAACCTCTTACAGCAGACTGAGGACCAAATTCCTTCCAACCTAGAAGGACCCTTTGTGAACT
TACTGCCTCCCCTGCTGCAAGAGGACTATCTCCTGAGCCTCGGGGAGGAGGAAGGCATCAGCGATCTCTTCGATGCTTAC
GATTTGGAAAAGCTCCCACTGGTGGAAGACTTCATGTGTAGTTGA
ATGCCCTTACAGCAGCAGGCAAAGCGAAGGCTGGAGCTAGGAGAAAGCGGTCATCAGTACCTCTCAGATGGTTTAAAAAC
CCCCAAGGGCAAAGGAAGAGCTGCACTACGAAGTCCAGATAGTCCAAAAAAAAAAACGCGGTATGATACGTCTCTTGGTC
TGCTCACCAAGAAGTTCATTCAGCTCCTGAGCCAGTCACCCGATGGGGTATTGGATTTGAACAAGGCAGCAGAAGTGCTA
AAAGTGCAAAAGAGAAGGATTTATGATATCACCAACGTTCTGGAAGGCATCCACCTCATTAAGAAGAAGTCTAAAAACAA
CGTCCAATGGATGGGCTGCAGTCTGTCTGAGGATGGGGGCATGCTGGCCCAGTGTCAAGGCCTGTCAAAAGAAGTGACCG
AGCTCAGTCAGGAAGAGAAGAAATTAGATGAACTGATCCAAAGCTGCACCCTGGACCTCAAACTGTTAACCGAGGATTCA
GAGAATCAAAGGTTAGCTTATGTTACATATCAAGATATTCGAAAAATTAGTGGCCTTAAAGACCAAACTGTTATAGTTGT
GAAAGCCCCTCCAGAAACAAGACTTGAAGTGCCTGACTCAATAGAGAGCCTACAAATACATTTGGCAAGTACCCAAGGGC
CCATTGAGGTTTACTTATGTCCAGAAGAGACTGAAACACACAGTCCAATGAAAACAAACAACCAAGACCACAATGGGAAT
ATCCCTAAACCCGCTTCCAAAGACTTGGCTTCAACCAACTCAGGACATAGCGATTGCTCAATTTCTATGGGAAACCTTTC
TCCTCTGGCCTCCCCAGCCAACCTCTTACAGCAGACTGAGGACCAAATTCCTTCCAACCTAGAAGGACCCTTTGTGAACT
TACTGCCTCCCCTGCTGCAAGAGGACTATCTCCTGAGCCTCGGGGAGGAGGAAGGCATCAGCGATCTCTTCGATGCTTAC
GATTTGGAAAAGCTCCCACTGGTGGAAGACTTCATGTGTAGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .62 RPM |
| SRP007412_cerebellum | 2 .12 RPM |
| SRP007412_heart | 9 .62 RPM |
| SRP007412_kidney | 13 .83 RPM |
| SRP007412_liver | 8 .05 RPM |
| SRP007412_testis | 8 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021045 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008679 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000112242 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011022 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000017649 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016269 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000011661 | within_species_paralog | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000000171 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1217 | 80.95 | 80.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1731 | 86.04 | 66.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000023584 retrocopies