Parental gene: | MRPL18, ENSPPYG00000017147 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:14477] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 6:163286371..163300408(+) |
>ENSPPYG00000017147
ATGGCGCTTCGGTCGCGGTTTTGGGGGTTGTTCTCGGTTTGCAGGAACCCTGGTTGCAGGTTCGCAGCCCTGTCAACCAG
CTCCGAGCCGGCAGCGAAACCTGAAGTGAACCGTGTGGAAAATGAAGCTGTCGCCCCAGAGTTCACCAACCGGAACCCCC
GGAACCTGGAGCTCTTATCTGTAGCCAGGAAAGAGCGGGGCTGGCGGACGGTGTTTCCCTCCCGTGAGTTCTGGCACAGG
TTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCACTTGTGGAGCATCAGAATGGCAAGGTTGTGGTTTCGGCCTCCAC
TCGTGAGTGGGCTATTAAAAAGCACCTTTACAGTACCAGAAATGTGGTGGCTTGTGAGAGTATAGGACGAGTGCTGGCAC
AGAGATGCTTAGAGGCGGGAATCAACTTCATGGTCTACCAGCCAACCCCGTGGGAGGCAGCCTCAGACTCGATGAAACGA
CTACGAAGTGCCATGACAGAAGGTGGTGTGGTTCTACGGGAACCTCAGAGAATCTATGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 25 .05 RPM |
| SRP007412_cerebellum | 19 .46 RPM |
| SRP007412_heart | 13 .49 RPM |
| SRP007412_kidney | 26 .35 RPM |
| SRP007412_liver | 20 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015398 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000011514 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007591 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000112110 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014075 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017037 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000057388 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007327 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018761 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000005322 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005598 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1416 | 55.74 | 66.11 | Please wait, loading  |
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| 2. | retro_pabe_1418 | 57.02 | 66.11 | Please wait, loading |
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| 3. | retro_pabe_1421 | 58.68 | 66.11 | Please wait, loading |
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Download FASTA sequences of all ENSPPYG00000017147 retrocopies