Parental gene:

PPP2CB, ENSPPYG00000018491

Aliases:None
Description:protein phosphatase 2, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9300]
Organism:Orangutan (Pongo abelii)
Coordinates:8:30781807..30808715(-)


>ENSPPYG00000018491
ATGGAAGACAAAAATTTCACCAAAGAGCTGGACCAGTGGGTTGAGCAGCTAAACGAGTGTAAGCAACTGAACGAGAACCA
AGTTCGGACGCTGTGTGAGAAGGCAAAGGAAATTTTAACAAAAGAATCAAATGTGCAAGAGGTTCGTTGCCCTGTTACTG
TCTGTGGAGATGTGCATGGTCAATTTCATGATCTTATGGAACTCTTTAGAATTGGTGGAAAATCACCAGATACAAACTAC
TTATTCATGGGTGACTATGTAGACAGAGGATATTATTCAGTGGAGACTGTGACTCTTCTTGTAGCATTAAAGGTGCGTTA
TCCAGAACGCATTACAATATTGAGAGGAAATCACGAAAGCAGACAGATTACCCAAGTATATGGCTTTTATGATGAATGTC
TGCGAAAGTATGGGAATGCCAACGTTTGGAAATATTTTACAGATCTCTTTGATTATCTTCCACTTACAGCTTTAGTAGAT
GGACAGATATTCTGCCTCCATGGTGGCCTGTCTCCATCCATAGACACACTGGATCATATAAGAGCCCTGGATCGCTTACA
GGAAGTTCCACATGAGGGCCCAATGTGTGATCTGTTATGGTCAGATCCAGATGATCGTGGTGGATGGGGTATTTCACCAC
GTGGTGCTGGCTACACATTTGGACAAGACATTTCTGAAACCTTTAACCATGCCAATGGTCTCACACTGGTTTCTCGTGCC
CACCAGCTTGTAATGGAGGGATACAATTGGTGTCATGATCGGAATGTGGTTACCATTTTCAGTGCACCCAATTACTGTTA
TCGTTGTGGGAACCAGGCTGCTATCATGGAATTAGATGACACTTTAAAATATTCCTTCCTTCAATTTGACCCAGCGCCTC
GTCGTGGCGAGCCTCATGTTACACGGCGCACCCCAGACTACTTCCTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 80 .50 RPM
SRP007412_cerebellum 103 .73 RPM
SRP007412_heart 57 .44 RPM
SRP007412_kidney 65 .37 RPM
SRP007412_liver 28 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012460 ortholog_one2one 1 retrogene
retro_cjac_985,
Dasypus novemcinctus ENSDNOG00000010906 ortholog_one2one 1 retrogene
retro_dnov_2211,
Homo sapiens ENSG00000104695 ortholog_one2one 1 retrogene
retro_hsap_1631,
Gorilla gorilla ENSGGOG00000013978 ortholog_one2one 1 retrogene
retro_ggor_380,
Macaca mulatta ENSMMUG00000020819 ortholog_one2one 1 retrogene
retro_mmul_484,
Monodelphis domestica ENSMODG00000019001 ortholog_one2many 2 retrogenes
retro_mdom_192, retro_mdom_632,
Oryctolagus cuniculus ENSOCUG00000005230 ortholog_one2one 1 retrogene
retro_ocun_1697,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_335 79.87 51.13
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Download FASTA sequences of all ENSPPYG00000018491 retrocopies