Parental gene:

ENSMODG00000019001

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:5:13701156..13746727(+)


>ENSMODG00000019001
ATGGAGGACAAGATATTCACGAAGGAGCTGGACCAGTGGGTGGAGCAGCTGAACGAATGCAAGCAGCTGAACGAGAACCA
AGTGCGCACGCTCTGCGAGAAGGCTAAGGAAATCCTCACAAAAGAATCCAATGTACAAGAAGTTCGTTGTCCTGTCACTG
TCTGCGGTGATGTCCACGGCCAATTCCACGATCTGATGGAACTCTTTAGAATTGGGGGAAAGTCGCCAGACACAAACTAT
CTCTTTATGGGTGACTATGTAGACAGAGGTTATTACTCAGTGGAGACTGTGACTCTTCTTGTATCATTAAAGGTACGCTA
TCCAGAGCGGATCACAATCTTAAGAGGAAACCACGAGAGCCGACAAATTACCCAGGTGTATGGCTTTTACGATGAGTGTC
TGAGGAAGTATGGCAATGCCAACGTGTGGAAATACTTCACTGATCTGTTTGATTATCTCCCACTCACAGCTTTAGTAGAT
GGACAGATATTTTGCCTCCATGGTGGCCTTTCTCCATCCATTGATACACTGGATCATATTAGAGCCCTGGATCGTCTGCA
AGAAGTTCCACATGAGGGTCCAATGTGTGACCTGTTATGGTCAGATCCCGATGATCGTGGTGGATGGGGCATTTCTCCAC
GAGGTGCTGGTTACACATTTGGACAGGACATTTCTGAAACATTTAACCATGCCAATGGCCTCACACTGGTTTCCCGTGCT
CACCAACTTGTGATGGAGGGTTACAACTGGTGTCATGATCGGAACGTGGTTACCATTTTCAGTGCCCCCAATTACTGCTA
CCGTTGTGGGAACCAGGCTGCTATCATGGAACTCGATGACACTTTAAAATATTCCTTCCTGCAATTTGACCCTGCACCCC
GTCGTGGAGAGCCCCATGTAACTCGGCGCACCCCAGACTACTTCCTATAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001615 ortholog_one2many 1 retrogene
retro_amel_663,
Bos taurus ENSBTAG00000009245 ortholog_one2many 3 retrogenes
retro_btau_1199, retro_btau_1750, retro_btau_704,
Choloepus hoffmanni ENSCHOG00000003467 ortholog_one2many 9 retrogenes
retro_chof_1247, retro_chof_1521, retro_chof_1556, retro_chof_2112, retro_chof_2267, retro_chof_2502, retro_chof_251, retro_chof_273, retro_chof_446,
Callithrix jacchus ENSCJAG00000012460 ortholog_one2many 1 retrogene
retro_cjac_985,
Dasypus novemcinctus ENSDNOG00000010906 ortholog_one2many 1 retrogene
retro_dnov_2211,
Echinops telfairi ENSETEG00000018123 ortholog_one2many 4 retrogenes
retro_etel_1607, retro_etel_1923, retro_etel_680, retro_etel_702,
Felis catus ENSFCAG00000025139 ortholog_one2many 1 retrogene
retro_fcat_1884,
Homo sapiens ENSG00000104695 ortholog_one2many 1 retrogene
retro_hsap_1631,
Gorilla gorilla ENSGGOG00000013978 ortholog_one2many 1 retrogene
retro_ggor_380,
Macaca mulatta ENSMMUG00000020819 ortholog_one2many 1 retrogene
retro_mmul_484,
Oryctolagus cuniculus ENSOCUG00000005230 ortholog_one2many 1 retrogene
retro_ocun_1697,
Otolemur garnettii ENSOGAG00000002488 ortholog_one2many 1 retrogene
retro_ogar_3188,
Pongo abelii ENSPPYG00000018491 ortholog_one2many 1 retrogene
retro_pabe_335,
Tursiops truncatus ENSTTRG00000000102 ortholog_one2many 1 retrogene
retro_ttru_1576,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_192 71.33 94.82
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2. retro_mdom_632 67.72 50.16
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Download FASTA sequences of all ENSMODG00000019001 retrocopies