Parental gene: | PPP2CB, ENSCJAG00000012460 |
| Aliases: | None |
| Description: | Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6XZ20] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 13:28769718..28799012(-) |
>ENSCJAG00000012460
ATGGACGACAAGGCGTTCACCAAGGAGCTGGACCAGTGGGTCGAGCAGCTGAACGAGTGTAAGCAGCTGAACGAGAACCA
AGTGCGGACGCTGTGCGAGAAGGCAAAGGAAATTTTAACAAAAGAATCAAATGTGCAAGAGGTTCGTTGCCCAGTTACGG
TCTGTGGAGATGTGCATGGTCAATTTCATGATCTTATGGAACTCTTTAGAATTGGTGGAAAATCACCAGATACAAACTAC
TTATTCATGGGTGACTATGTAGACAGAGGATATTATTCAGTGGAGACTGTGACTCTTCTTGTAGCATTAAAGGTGCGTTA
TCCAGAACGCATTACAATATTGAGAGGAAATCACGAAAGCCGACAAATTACTCAAGTATATGGCTTTTATGATGAATGTC
TGCGAAAGTATGGGAATGCCAATGTTTGGAAATATTTTACAGATCTCTTTGATTATCTTCCACTTACAGCTTTAGTAGAT
GGACAGATATTCTGCCTCCATGGTGGCCTCTCTCCATCCATAGACACACTGGATCATATAAGAGCCCTGGATCGTTTACA
GGAAGTTCCTCATGAGGGCCCAATGTGTGATCTGTTATGGTCAGATCCAGATGATCGTGGTGGATGGGGTATTTCACCAC
GTGGTGCTGGCTACACATTTGGACAAGACATTTCTGAAACCTTTAACCATGCCAATGGTCTCACACTGGTTTCTCGTGCC
CACCAGCTTGTAATGGAGGGATACAATTGGTGTCATGATCGGAATGTGGTTACCATTTTCAGTGCACCCAATTACTGTTA
TCGTTGTGGGAACCAGGCTGCTATCATGGAATTAGATGACACTTTAAAATATTCCTTCCTTCAGTTTGACCCAGCGCCCC
GTCGTGGCGAGCCTCATGTTACACGGCGCACCCCAGACTACTTCCTATAA
ATGGACGACAAGGCGTTCACCAAGGAGCTGGACCAGTGGGTCGAGCAGCTGAACGAGTGTAAGCAGCTGAACGAGAACCA
AGTGCGGACGCTGTGCGAGAAGGCAAAGGAAATTTTAACAAAAGAATCAAATGTGCAAGAGGTTCGTTGCCCAGTTACGG
TCTGTGGAGATGTGCATGGTCAATTTCATGATCTTATGGAACTCTTTAGAATTGGTGGAAAATCACCAGATACAAACTAC
TTATTCATGGGTGACTATGTAGACAGAGGATATTATTCAGTGGAGACTGTGACTCTTCTTGTAGCATTAAAGGTGCGTTA
TCCAGAACGCATTACAATATTGAGAGGAAATCACGAAAGCCGACAAATTACTCAAGTATATGGCTTTTATGATGAATGTC
TGCGAAAGTATGGGAATGCCAATGTTTGGAAATATTTTACAGATCTCTTTGATTATCTTCCACTTACAGCTTTAGTAGAT
GGACAGATATTCTGCCTCCATGGTGGCCTCTCTCCATCCATAGACACACTGGATCATATAAGAGCCCTGGATCGTTTACA
GGAAGTTCCTCATGAGGGCCCAATGTGTGATCTGTTATGGTCAGATCCAGATGATCGTGGTGGATGGGGTATTTCACCAC
GTGGTGCTGGCTACACATTTGGACAAGACATTTCTGAAACCTTTAACCATGCCAATGGTCTCACACTGGTTTCTCGTGCC
CACCAGCTTGTAATGGAGGGATACAATTGGTGTCATGATCGGAATGTGGTTACCATTTTCAGTGCACCCAATTACTGTTA
TCGTTGTGGGAACCAGGCTGCTATCATGGAATTAGATGACACTTTAAAATATTCCTTCCTTCAGTTTGACCCAGCGCCCC
GTCGTGGCGAGCCTCATGTTACACGGCGCACCCCAGACTACTTCCTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 17 .71 RPM |
| SRP051959_skeletal_muscle | 11 .31 RPM |
| SRP051959_lymph_node | 10 .30 RPM |
| SRP051959_lung | 24 .82 RPM |
| SRP051959_liver | 9 .55 RPM |
| SRP051959_kidney | 33 .12 RPM |
| SRP051959_heart | 22 .52 RPM |
| SRP051959_colon | 29 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013634 | within_species_paralog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000010906 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000104695 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013978 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020819 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019001 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005230 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018491 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_985 | 93.20 | 66.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012460 retrocopies