Parental gene: | SAPCD2, ENSPPYG00000019804 |
| Aliases: | None |
| Description: | suppressor APC domain containing 2 [Source:HGNC Symbol;Acc:28055] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 9:134062007..134068286(-) |
>ENSPPYG00000019804
ATGGCCGAGCGGGGCCGCGTGCCTCCCCCCGCACCCGCGCCCAGCACGGAGGGGCTGCCGCGCGCCTTCCTGCAGAGCCT
GCGCACCCTGTTCGACATCCTGGACGACCGGCGGCGCGGCTGCGTGCACCTGCGCGAGATCGAGTCCCGCTGGCAGGGCA
CTGACGCGCGGGAGCTGCCCCGCGGGGTGCTGGAGGGCTTGCGCCAGGTGGCCCCGGCCAGCGGCTACCTGACCTTCGAG
CGCTTCGTGGCCGGCCTGCGCACCTCCCTGCTGAGCGCCGACGGCGGCCCCCGGGACCCCACGCGCGCCCCGCGCGCCCC
GGCCGGGCCCGGGGACCAGCCGCCGCCGCCGCCGCAGCGCCTGGTGTTCGCGCCGGCCGACGAGCCGCGGACGGTCCTGG
AGAGGAAGCCCCTGCCCCTGGGCGTGCGCGCCCCTCTGGCCGGTCCCAGCGGCGCCGCCCGCAGCCCGGAGCAGTTGTGC
GCCCCGGCCGAGGCGGCGCCCTGCCCCGCGGAGCCCGAGCGGTCCCAGAGCGCGGCGCTGGAACCGAGCTCCAGCGCGGA
CGCTGGTGCAGTGGCCTGCAGGGCCCTGGAGGCGGACTCAGGGGATGCCCGGCGGGCCCCCCGTGCCCGAGGGGAACGTC
GGAGGCACACCATCACCAGCGGCGTGGACTGTGGCCTGCTGAAGCAGATGAAGGAGCTGGAGCAGGAGAAGGAGGTGCTG
CTGCAGGGTTTGGAGATGATGGCGCGGGGCCGCGACTGGTACCAGCAGCAGCTGCAACGAGTGCAGGAGCGCCAGCGCCA
CCTGGGCCAGAGCAGAGCCAGCGCCGACTTTGGGGCTGCAGGGAGCCCCCGCCCACTGGGGCGGCTACTGCCCAAGGTAC
AGGAGGTGGCCCGGTGCCTGGGGGAGCTGCTGGCTGCAGCCTGTGCCAGCCGGGCCCTGCCCCCGTCCTCCTCCGGGCCC
CCCTGCCCTGCCCTGACGTCCACCTCACCCCGGGGATGGCAGCAGCAGACCATCCTCATGCTGAAGGAGCAGAACCGACT
CCTCACCCAGGAGGTGACCGAGAAGAGTGAGCGCATCACGCAGCTGGAGCAGGAGAAGTCGGCGCTCATTAAGCAGCTGT
TTGAGGCCCGCGCCCTGAGCCAGCAGGACGGGGGACCTCTGGATTCCACCTTCATCTAG
ATGGCCGAGCGGGGCCGCGTGCCTCCCCCCGCACCCGCGCCCAGCACGGAGGGGCTGCCGCGCGCCTTCCTGCAGAGCCT
GCGCACCCTGTTCGACATCCTGGACGACCGGCGGCGCGGCTGCGTGCACCTGCGCGAGATCGAGTCCCGCTGGCAGGGCA
CTGACGCGCGGGAGCTGCCCCGCGGGGTGCTGGAGGGCTTGCGCCAGGTGGCCCCGGCCAGCGGCTACCTGACCTTCGAG
CGCTTCGTGGCCGGCCTGCGCACCTCCCTGCTGAGCGCCGACGGCGGCCCCCGGGACCCCACGCGCGCCCCGCGCGCCCC
GGCCGGGCCCGGGGACCAGCCGCCGCCGCCGCCGCAGCGCCTGGTGTTCGCGCCGGCCGACGAGCCGCGGACGGTCCTGG
AGAGGAAGCCCCTGCCCCTGGGCGTGCGCGCCCCTCTGGCCGGTCCCAGCGGCGCCGCCCGCAGCCCGGAGCAGTTGTGC
GCCCCGGCCGAGGCGGCGCCCTGCCCCGCGGAGCCCGAGCGGTCCCAGAGCGCGGCGCTGGAACCGAGCTCCAGCGCGGA
CGCTGGTGCAGTGGCCTGCAGGGCCCTGGAGGCGGACTCAGGGGATGCCCGGCGGGCCCCCCGTGCCCGAGGGGAACGTC
GGAGGCACACCATCACCAGCGGCGTGGACTGTGGCCTGCTGAAGCAGATGAAGGAGCTGGAGCAGGAGAAGGAGGTGCTG
CTGCAGGGTTTGGAGATGATGGCGCGGGGCCGCGACTGGTACCAGCAGCAGCTGCAACGAGTGCAGGAGCGCCAGCGCCA
CCTGGGCCAGAGCAGAGCCAGCGCCGACTTTGGGGCTGCAGGGAGCCCCCGCCCACTGGGGCGGCTACTGCCCAAGGTAC
AGGAGGTGGCCCGGTGCCTGGGGGAGCTGCTGGCTGCAGCCTGTGCCAGCCGGGCCCTGCCCCCGTCCTCCTCCGGGCCC
CCCTGCCCTGCCCTGACGTCCACCTCACCCCGGGGATGGCAGCAGCAGACCATCCTCATGCTGAAGGAGCAGAACCGACT
CCTCACCCAGGAGGTGACCGAGAAGAGTGAGCGCATCACGCAGCTGGAGCAGGAGAAGTCGGCGCTCATTAAGCAGCTGT
TTGAGGCCCGCGCCCTGAGCCAGCAGGACGGGGGACCTCTGGATTCCACCTTCATCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .28 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .66 RPM |
| SRP007412_liver | 0 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000186193 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000007112 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008908 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000021589 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3124 | 75.77 | 74.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3222 | 78.83 | 69.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3223 | 71.28 | 70.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_3233 | 73.03 | 83.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_3527 | 93.98 | 67.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000019804 retrocopies