Parental gene: | SAPCD2, ENSPTRG00000021589 |
| Aliases: | None |
| Description: | suppressor APC domain containing 2 [Source:HGNC Symbol;Acc:28055] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 9:136662836..136668334(-) |
>ENSPTRG00000021589
CCGGCGGAGGCGGCGCCCTGCCCCGCGGAGCTCGAGCGGTCCCAGAGCGCGGCGCTGGAACCGAGCTCCAGCGCGGACGC
AGGTGCAGTGGCGTGCAGGGCCCTGGAGGCGGACTCAGGGGATGCCCGGCGGGCTCCCCGTGCCCGAGGGGAACGTCGGA
GGCACACCATCACCAGCGGCGTGGACTGCGGCCTGCTGAAGCAGATGAAGGAGCTGGAGCAGGAGAAGGAGGTGCTGCTG
CAGGGTTTGGAGATGATGGCGCGGGGCCGCGACTGGTACCAGCAGCAGCTGCAACGAGTGCAGGAGCGCCAGCGCCGCCT
GGGCCAGAGCAGAGCCAGCGCCGACTTTGGGGCTGCAGGGAGCCCCCGCCCACTGGGGCGGCTACTGCCCAAGGTACAAG
AGGTGGCCCGGTGCCTGGGGGAGCTGCTGGCTGCAGCCTGTGCCAGCCGGGCCCTGCCCCCGTCCTCCTCTGGGCCCCCC
TGCCCTGCCCTGAGGTCCACCTCGCCCCCGGTCTGGCAGCAGCAGACCATCCTCATGCTGAAGGAGCAGAACCGACTCCT
CACCCAGGAGGTGACCGAGAAGAGTGAGCGCATCACGCAGCTGGAGCAGGAGAAGTCGGCGCTCATTAAGCAGCTGTTTG
AGGCCCGCGCCCTGAGCCAGCAGGACGGGGGACCTCTGGATTCCACCTTCATCTAG
CCGGCGGAGGCGGCGCCCTGCCCCGCGGAGCTCGAGCGGTCCCAGAGCGCGGCGCTGGAACCGAGCTCCAGCGCGGACGC
AGGTGCAGTGGCGTGCAGGGCCCTGGAGGCGGACTCAGGGGATGCCCGGCGGGCTCCCCGTGCCCGAGGGGAACGTCGGA
GGCACACCATCACCAGCGGCGTGGACTGCGGCCTGCTGAAGCAGATGAAGGAGCTGGAGCAGGAGAAGGAGGTGCTGCTG
CAGGGTTTGGAGATGATGGCGCGGGGCCGCGACTGGTACCAGCAGCAGCTGCAACGAGTGCAGGAGCGCCAGCGCCGCCT
GGGCCAGAGCAGAGCCAGCGCCGACTTTGGGGCTGCAGGGAGCCCCCGCCCACTGGGGCGGCTACTGCCCAAGGTACAAG
AGGTGGCCCGGTGCCTGGGGGAGCTGCTGGCTGCAGCCTGTGCCAGCCGGGCCCTGCCCCCGTCCTCCTCTGGGCCCCCC
TGCCCTGCCCTGAGGTCCACCTCGCCCCCGGTCTGGCAGCAGCAGACCATCCTCATGCTGAAGGAGCAGAACCGACTCCT
CACCCAGGAGGTGACCGAGAAGAGTGAGCGCATCACGCAGCTGGAGCAGGAGAAGTCGGCGCTCATTAAGCAGCTGTTTG
AGGCCCGCGCCCTGAGCCAGCAGGACGGGGGACCTCTGGATTCCACCTTCATCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .59 RPM |
| SRP007412_cerebellum | 0 .29 RPM |
| SRP007412_heart | 0 .03 RPM |
| SRP007412_kidney | 0 .81 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000186193 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000007112 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008908 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000019804 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2530 | 79.49 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2532 | 76.67 | 50.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2534 | 76.67 | 50.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2537 | 80.60 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2543 | 84.14 | 62.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_2992 | 76.67 | 50.22 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000021589 retrocopies