Parental gene: | RPL10, ENSPPYG00000020874 |
| Aliases: | None |
| Description: | 60S ribosomal protein L10 [Source:RefSeq peptide;Acc:NP_001126004] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | X:154522167..154524639(+) |
>ENSPPYG00000020874
ATGGGCCGCCGCCCCGCCCGTTGTTACCGATATTGTAAGAACAAGCCGTACCCAAAGTCTCGCTTCTGCCGAGGTGTCCC
TGATGCCAAGATTCGCATTTTTGACCTGGGGCGGAAGAAGGCAAAAGTGGATGAGTTTCCGCTCTGTGGCCACATGGTAT
CAGATGAATATGAGCAGCTGTCCTCTGAAGCCCTGGAGGCTGCCCGAATTTGTGCCAATAAGTACATGGTAAAAAGTTGT
GGCAAAGATGGCTTCCATATCCGGGTGAGGCTCCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGTGCTGG
GGCTGACAGGCTCCAAACAGGCATGCGAGGTGCCTTTGGAAAGCCCCAGGGCACTGTGGCCAGGGTTCACATTGGCCAAG
TTATCATGTCCATCCGCACCAAGCTGCAGAACAAGGAGCATGTGATTGAGGCTCTGCGCAGGGCCAAGTTCAAGTTTCCT
GGCCGCCAGAAGATCCACATCTCAAAGAAGTGGGGCTTCACCAAGTTCAATGCTGATGAATTTGAAGACATGGTGGCTGA
GAAGCGGCTCATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAATCGTGGCCCTCTGGACAAGTGGCGGGCCCTGCACT
CATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 173 .12 RPM |
| SRP007412_cerebellum | 94 .12 RPM |
| SRP007412_heart | 266 .99 RPM |
| SRP007412_kidney | 425 .70 RPM |
| SRP007412_liver | 442 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007454 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000147403 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000013163 | possible_ortholog | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000014337 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000008731 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000008682 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_173 | 95.33 | 100.00 | Please wait, loading  |
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| 2. | retro_pabe_1854 | 87.50 | 52.34 | Please wait, loading |
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| 3. | retro_pabe_2036 | 87.50 | 52.34 | Please wait, loading |
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| 4. | retro_pabe_2843 | 84.27 | 82.24 | Please wait, loading |
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| 5. | retro_pabe_2955 | 71.50 | 89.25 | Please wait, loading |
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Download FASTA sequences of all ENSPPYG00000020874 retrocopies