Parental gene:

GYG1, ENSPPYG00000025899

Aliases:None
Description:glycogenin 1 [Source:HGNC Symbol;Acc:4699]
Organism:Orangutan (Pongo abelii)
Coordinates:3:151768094..151802081(+)


>ENSPPYG00000025899
ATGAGAAAAGTTTTAGAGACAGTCTTTGATGAAGTCATCATGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAAC
CTTAATGAAGAGGCCAGAGTTGGGTGTCACGCTGACAAAGCTCCACTGCTGGTCGCTTACACAGTATTCAAAATGTGTAT
TCATGGATGCAGATACTCTGGTCCTAGCAAATATTGATGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCA
GGGTGGCCTGACTGCTTCAATTCCGGAGTCTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCATCTTGC
TTCTGAGCAAGGTAGTTTTGATGGTGGGGACCAAGGCATACTGAACACATTTTTTAGCAGCTGGGCAACGACAGATATCA
GAAAACACCTGCCGTTTATTTATAACCTAAGCAGCATCTCTATATACTCCTACCTCCCGGCATTTAAAGTGTTTGGTGCA
AGTGCCAAAGTTGTGCATTTCCTGGGACGAGTCAAACCATGGAATTATACTTACGATCCCAAAACAAAAAACATCAAAAG
TGAGGCCCATGATCCCAACATGACTCATCCAGAGTTTCTCATCCTGTGGTGGAATATCTTTACCACCAACGTTTTACCTC
TGCTTCAACAATTTGGCCTTGTCAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTC
TCTTGTGGCTTCTGTAGAAAGGAAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACA
GCCGTTTGTATCCTCGGAAGAACGGAAGGAGCGATGGGAACAGGGCCAGGCTGATTATATGGGAGCAGATTCCTTTGACA
ACATCAAGAGGAAACTTGACACTTACCTCCAGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .64 RPM
SRP007412_cerebellum 14 .11 RPM
SRP007412_heart 27 .79 RPM
SRP007412_kidney 7 .23 RPM
SRP007412_liver 15 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001467 ortholog_one2one 2 retrogenes
retro_cjac_1049, retro_cjac_2915,
Danio rerio ENSDARG00000011934 ortholog_one2many 1 retrogene
retro_drer_23,
Homo sapiens ENSG00000163754 ortholog_one2one 2 retrogenes
retro_hsap_1222, retro_hsap_159,
Myotis lucifugus ENSMLUG00000006382 ortholog_one2one 1 retrogene
retro_mluc_2351,
Macaca mulatta ENSMMUG00000005521 ortholog_one2one 2 retrogenes
retro_mmul_1297, retro_mmul_376,
Nomascus leucogenys ENSNLEG00000002557 ortholog_one2one 2 retrogenes
retro_nleu_1556, retro_nleu_693,
Oryctolagus cuniculus ENSOCUG00000003516 ortholog_one2one 1 retrogene
retro_ocun_1766,
Pan troglodytes ENSPTRG00000015509 ortholog_one2one 1 retrogene
retro_ptro_836,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1015 82.68 75.66
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2. retro_pabe_1080 77.82 77.96
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Download FASTA sequences of all ENSPPYG00000025899 retrocopies