Parental gene: | CSRP1, ENSPTRG00000001836 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:180249946..180274214(-) |
>ENSPTRG00000001836
ATGCCGAACTGGGGAGGAGGCAAGAAATGTGGGGTGTGTCAGAAGACGGTTTACTTTGCCGAAGAGGTTCAGTGCGAAGG
CAACAGCTTCCATAAATCCTGCTTCCTGTGCATGGTCTGCAAGAAGAATCTGGACAGTACCACTGTGGCCGTGCATGGTG
AGGAGATCTACTGCAAGTCCTGCTACGGCAAGAAGTATGGGCCCAAAGGCTATGGCTACGGGCAGGGCGCAGGCACCCTC
AGCACTGACAAGGGGGAGTCGCTGGGTATCAAGCACGAGGAAGCCCCTGGCCACAGGCCCACCACCAACCCCAACGCATC
CAAATTTGCCCAGAAGATTGGTGGCTCCGAGCGCTGCCCCCGATGCAGCCAGGCAGTCTATGCTGCGGAGAAGGTGATTG
GTGCTGGGAAGTCCTGGCATAAGGCCTGCTTTCGATGTGCCAAGTGTGGCAAAGGCCTTGAGTCAACCACCCTGGCGGAC
AAGGATGGTGAGATTTACTGCAAAGGATGTTATGCTAAAAACTTCGGGCCCAAGGGCTTTGGTTTTGGGCAAGGAGCTGG
GGCCTTGGTCCACTCTGAGTGA
ATGCCGAACTGGGGAGGAGGCAAGAAATGTGGGGTGTGTCAGAAGACGGTTTACTTTGCCGAAGAGGTTCAGTGCGAAGG
CAACAGCTTCCATAAATCCTGCTTCCTGTGCATGGTCTGCAAGAAGAATCTGGACAGTACCACTGTGGCCGTGCATGGTG
AGGAGATCTACTGCAAGTCCTGCTACGGCAAGAAGTATGGGCCCAAAGGCTATGGCTACGGGCAGGGCGCAGGCACCCTC
AGCACTGACAAGGGGGAGTCGCTGGGTATCAAGCACGAGGAAGCCCCTGGCCACAGGCCCACCACCAACCCCAACGCATC
CAAATTTGCCCAGAAGATTGGTGGCTCCGAGCGCTGCCCCCGATGCAGCCAGGCAGTCTATGCTGCGGAGAAGGTGATTG
GTGCTGGGAAGTCCTGGCATAAGGCCTGCTTTCGATGTGCCAAGTGTGGCAAAGGCCTTGAGTCAACCACCCTGGCGGAC
AAGGATGGTGAGATTTACTGCAAAGGATGTTATGCTAAAAACTTCGGGCCCAAGGGCTTTGGTTTTGGGCAAGGAGCTGG
GGCCTTGGTCCACTCTGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 264 .70 RPM |
| SRP007412_cerebellum | 172 .32 RPM |
| SRP007412_heart | 61 .56 RPM |
| SRP007412_kidney | 277 .39 RPM |
| SRP007412_liver | 95 .81 RPM |
| SRP007412_testis | 15 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012114 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000017067 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020772 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026421 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000033768 | within_species_paralog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008991 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0259209 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1920 | 72.78 | 80.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1922 | 70.00 | 81.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000001836 retrocopies