Parental gene: | PPP1R1A, ENSPTRG00000005044 |
| Aliases: | None |
| Description: | protein phosphatase 1, regulatory (inhibitor) subunit 1A [Source:HGNC Symbol;Acc:9286] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 12:34634926..34638311(+) |
>ENSPTRG00000005044
CAGATTCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGATAGATGAAGACCG
GATCCCCAACCCACATCTCAAGTCCACTTTGGCAATGTCTCCACGGCAACGGAAGAAGATGACAAGGATCACACCCACAA
TGAAAGAGCTCCAGATGATGGTTGAACATCACCTGGGGCAACAGCAGCAAGGAGAGGAACCTGAGGGGGCCGCTGAGAGC
ACAGGAACCCAGGAGTCCCGCCCACCTGGGATCCCAGACACAGAAGTGGAGTCAAGGCTGGGCACCTCTGGGACAGCAAA
AAAGCCTGCAGAATGCATCCCTAAAACTCACGAGAGAGGCAGTAAGGAACCCAGCACAAAAGAACCCTCAACCCATATAC
CACCACTGGATTCCAAGGGAGCCAACTCGGTA
CAGATTCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGATAGATGAAGACCG
GATCCCCAACCCACATCTCAAGTCCACTTTGGCAATGTCTCCACGGCAACGGAAGAAGATGACAAGGATCACACCCACAA
TGAAAGAGCTCCAGATGATGGTTGAACATCACCTGGGGCAACAGCAGCAAGGAGAGGAACCTGAGGGGGCCGCTGAGAGC
ACAGGAACCCAGGAGTCCCGCCCACCTGGGATCCCAGACACAGAAGTGGAGTCAAGGCTGGGCACCTCTGGGACAGCAAA
AAAGCCTGCAGAATGCATCCCTAAAACTCACGAGAGAGGCAGTAAGGAACCCAGCACAAAAGAACCCTCAACCCATATAC
CACCACTGGATTCCAAGGGAGCCAACTCGGTA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 21 .34 RPM |
| SRP007412_cerebellum | 17 .75 RPM |
| SRP007412_heart | 23 .52 RPM |
| SRP007412_kidney | 38 .18 RPM |
| SRP007412_liver | 78 .17 RPM |
| SRP007412_testis | 0 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000010159 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000135447 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008380 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004608 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001193 | ortholog_one2one | 20 retrogenes |
retro_tbel_1191, retro_tbel_1233, retro_tbel_1251, retro_tbel_1264, retro_tbel_138, retro_tbel_1881, retro_tbel_2036, retro_tbel_2437, retro_tbel_2574, retro_tbel_2720, retro_tbel_3243, retro_tbel_3316, retro_tbel_3377, retro_tbel_3380, retro_tbel_3414, retro_tbel_3426, retro_tbel_4551, retro_tbel_537, retro_tbel_669, retro_tbel_899,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_619 | 71.30 | 79.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1138 | 58.46 | 88.19 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000005044 retrocopies