Parental gene:

C12orf29, ENSPTRG00000005277

Aliases:None
Description:chromosome 12 open reading frame 29 [Source:HGNC Symbol;Acc:25322]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:88186118..88200867(+)


>ENSPTRG00000005277
ATGAAGCGCTTGGGCTCCGTGCAGCGGAAAATACCGTGTGTGTTTGTGACGGAGGTGAAAGAGGAGCCTTCCTCCAAAAG
GGAGCATCAGCCATTTAAAGTTTTGGCAACTGAAACTATAAGTCACAAGGCATTAGATGCAGATATATACAGTGCAATTC
CAACAGAAAAAGTGGATGGAACATGTTGTTATGTTACTACCTATAAAGATCAGCCATACCTTTGGGCTCGACTAGATAGA
AAACCCAACAAACAAGCTGAAAAAAGATTTAAAAATTTTCTACATTCAAAAGAAAACCCAAAAGAATTTTTTTGGAATGT
TGAGGAGGACTTCAAACCAGCTCCAGAGTGCTGGATACCAGCAAAGGAGACAGAACAAATAAATGGGAACCCAGTGCCTG
ATGAAAATGGACACATTCCTGGTTGGGTACCAGTGGAGAAAAACAACAAACAGTATTGCTGGCATTCCTCTGTAGTTAAT
TATGAATTTGAAATTGCCCTGGTACTAAAACATCATCCTGATGATTCTGGACTTTTGGAAATTAGTGCAGTGCCACTTTC
AGATCTCTTAGAACAAACACTGGAGCTCATAGGAACAAATATCAATGGAAACCCATATGGGTTAGGGAGCAAGAAACATC
CATTACATCTTCTTATACCACATGGAGCATTTCAAATAAGAAATCTACCTTCATTGAAGCACAATGATCTCGTGTCCTGG
TTTGAAGATTGCAAAGAGGGTAAAATTGAAGGAATAGTGTGGCATTGCAGTGATGGCTGTTTAATAAAGGTCCATCGCCA
TCATCTTGGCTTATGCTGGCCAATTCCAGATACTTACATGAATTCAAGACCAGTTATTATCAACATGAACCTGAACAAAT
GTGACTCTGCCTTTGATATTAAGTGTTTGTTTAATCATTTTTTAAAAATAGATAATCAGAAATTTGTTAGACTCAAAGAT
ATAATATTTGATGTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 9 .08 RPM
SRP007412_cerebellum 7 .74 RPM
SRP007412_heart 2 .04 RPM
SRP007412_kidney 3 .64 RPM
SRP007412_liver 2 .06 RPM
SRP007412_testis 7 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011011 ortholog_one2one 1 retrogene
retro_chof_1262,
Homo sapiens ENSG00000133641 ortholog_one2one 1 retrogene
retro_hsap_3984,
Gorilla gorilla ENSGGOG00000005986 ortholog_one2one 1 retrogene
retro_ggor_2674,
Loxodonta africana ENSLAFG00000013286 ortholog_one2one 1 retrogene
retro_lafr_706,
Macaca mulatta ENSMMUG00000015860 ortholog_one2one 1 retrogene
retro_mmul_715,
Nomascus leucogenys ENSNLEG00000005396 ortholog_one2one 1 retrogene
retro_nleu_1905,
Rattus norvegicus ENSRNOG00000006973 ortholog_one2one 1 retrogene
retro_rnor_1625,
Tupaia belangeri ENSTBEG00000005256 ortholog_one2one 1 retrogene
retro_tbel_94,
Tarsius syrichta ENSTSYG00000014665 ortholog_one2one 1 retrogene
retro_tsyr_1572,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2704 86.29 53.85
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Download FASTA sequences of all ENSPTRG00000005277 retrocopies