Parental gene:

C12orf45, ENSPTRG00000005381

Aliases:None
Description:chromosome 12 open reading frame 45 [Source:HGNC Symbol;Acc:28628]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:105310354..105318742(+)


>ENSPTRG00000005381
ATGGAGGTCCATGGCAAGCCCCAGGCTAGCCCGAGTTGTTCGTCGCCCACCCGGGATTCCTCAGGAGTCCCAGTGTCCAA
GGAGCTGCTGACGGCGGGAAGCGACGGCCGCGGAGGTATATGGGACAGGTTGCTCATCAACTCCCAACCTAAGTCCAGAA
AGACCTCCACTCTTCAAACAGTTCGGATAGAGAGGAGTCCCTTATTGGACCAGGTACAGACATTTCTCCCACAGATGGCA
CGGGCAAATGAAAAGCTAAGAAAAGAAATGGCAGCTGCACCACCTGGTCGTTTCAATATTGAAAACATTGATGGGCCTCA
TAGTAAAGTTATACAAATGGATGTGGCTTTGTTTGAGATGAATCAGTCGGATTCAAAAGAAGTGGACAGTTCAGAAGAGA
GTTCACAAGACAGTTCAGAGAACAGTTCAGAATCAGAAGACGAAGATGACAGCATCCCATCTGAAGTCACCATAGATAAC
ATTAAGCTTCCCAATTCTGAAGGTGGAAAAGGCAAGATTGAAGTTTTGGACAGTCCAGCAAGTAAAAAAAAGAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .07 RPM
SRP007412_cerebellum 1 .68 RPM
SRP007412_heart 1 .78 RPM
SRP007412_kidney 2 .59 RPM
SRP007412_liver 5 .83 RPM
SRP007412_testis 1 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014728 ortholog_one2many 1 retrogene
retro_cjac_333,
Dasypus novemcinctus ENSDNOG00000017235 ortholog_one2one 1 retrogene
retro_dnov_2327,
Homo sapiens ENSG00000151131 ortholog_one2one 1 retrogene
retro_hsap_292,
Gallus gallus ENSGALG00000012694 ortholog_one2one 1 retrogene
retro_ggal_15,
Gorilla gorilla ENSGGOG00000027272 ortholog_one2one 1 retrogene
retro_ggor_331,
Macaca mulatta ENSMMUG00000017133 ortholog_one2one 1 retrogene
retro_mmul_551,
Nomascus leucogenys ENSNLEG00000006584 ortholog_one2one 1 retrogene
retro_nleu_2414,
Pongo abelii ENSPPYG00000004897 ortholog_one2one 1 retrogene
retro_pabe_382,
Sus scrofa ENSSSCG00000027792 ortholog_one2one 2 retrogenes
retro_sscr_105, retro_sscr_153,
Tursiops truncatus ENSTTRG00000005714 ortholog_one2many 1 retrogene
retro_ttru_1381,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_240 60.43 74.59
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Download FASTA sequences of all ENSPTRG00000005381 retrocopies