Parental gene:

TUFM, ENSPTRG00000007939

Aliases:None
Description:Elongation factor Tu [Source:UniProtKB/TrEMBL;Acc:H2QAU9]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:28996891..29000881(-)


>ENSPTRG00000007939
ATGACCACAATGGCGGCCGCCACCCTGCTGCGCGCGACGCCCCACTTCAGCGGTCTCGCCGCCGGCCGGACCTTCCTGCT
GCAGGGTCTGTTGCGGCTGCTGAAAGCCCCGGCATTGCCTCTCTTGTGCCGCGGCCTGGCCGTGGAGGCCAAGAAGACTT
ACGTGCGCGACAAGCCACATGTGAATGTGGGTACCATCGGCCATGTGGACCACGGCAAGACCACGCTGACTGCAGCTATC
ACGAAGATTCTAGCTGAGGGAGGTGGGGCTAAGTTCAAGAAGTACGAAGAGATTGACAATGCCCCGGAGGAGCGAGCTCG
GGGTATCACCATCAATGCGGCTCATGTGGAGTATAGCACTGCCGCCCGCCACTACGCCCACACAGACTGCCCGGGTCATG
CAGATTATGTTAAGAATATGATCACAGGCACTGCACCCCTCGACGGCTGCATCCTGGTGGTAGCAGCCAATGACGGCCCC
ATGCCCCAGACCCGAGAGCACTTATTACTGGCCAGACAGATTGGGGTGGAGCATGTGGTGGTGTATGTGAACAAGGCTGA
CGCTGTCCAGGACTCTGAGATGGTGGAACTGGTGGAACTGGAGATCCGGGAGCTGCTCACCGAGTTTGGCTATAAAGGGG
AGGAGACCCCAGTCATCGTAGGCTCTGCTCTCTGTGCCCTTGAGGGTCGGGACCCTGAGTTAGGCCTGAAGTCTGTGCAG
AAGCTACTGGATGCTGTGGACACGTACATCCCAGTGCCCGCCCGGGACCTGGAGAAGCCTTTCCTGCTGCCTGTGGAGGC
GGTGTACTCCGTCCCTGGCCGTGGCACCGTGGTGACAGGTACACTAGAGCGTGGCATTTTAAAGAAGGGAGATGAGTGTG
AGCTCCTAGGACATAGCAAGAACATCCGCACTGTGGTGACAGGCATTGAGATGTTCCACAAGAGCCTGGAGAGGGCCGAA
GCCGGAGATAACCTCGGGGCCCTGGTCCGAGGCTTGAAGCGGGAGGACTTGCGGCGGGGCCTGGTCATGGTCAAGCCGGG
TTCCATCAAGCCCCACCAGAAGGTGGAGGCCCAGGTTTACATCCTCAGCAAGGAGGAAGGTGGCCGCCACAAGCCCTTTG
TGTCCCACTTCATGCCTGTCATGTTCTCCCTGACTTGGGACATGGCCTGTCGGATTATCCTGCCCCCAGAGAAGGAGCTT
GCCATGCCCGGGGAGGACCTGAAGTTCAACCTAATCTTGCGGCAGCCAATGATCTTAGAGAAAGGCCAGCGTTTCACCCT
GCGAGATGGCAACCGGACTATTGGCACCGGTCTAGTCACCAACACGCTGGCCATGACTGAGGAGGAGAAGAACATCAAAT
GGGGTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 118 .29 RPM
SRP007412_cerebellum 104 .07 RPM
SRP007412_heart 136 .29 RPM
SRP007412_kidney 261 .67 RPM
SRP007412_liver 225 .90 RPM
SRP007412_testis 108 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000016474 ortholog_one2one 1 retrogene
retro_dord_278,
Homo sapiens ENSG00000178952 ortholog_one2one 1 retrogene
retro_hsap_1816,
Macropus eugenii ENSMEUG00000011131 ortholog_one2one 1 retrogene
retro_meug_1783,
Monodelphis domestica ENSMODG00000015564 ortholog_one2one 1 retrogene
retro_mdom_384,
Mus musculus ENSMUSG00000073838 ortholog_one2many 1 retrogene
retro_mmus_10,
Ornithorhynchus anatinus ENSOANG00000013114 ortholog_one2one 1 retrogene
retro_oana_36,
Oryctolagus cuniculus ENSOCUG00000002683 ortholog_one2one 1 retrogene
retro_ocun_333,
Rattus norvegicus ENSRNOG00000018604 ortholog_one2one 1 retrogene
retro_rnor_1134,
Vicugna pacos ENSVPAG00000009541 ortholog_one2one 1 retrogene
retro_vpac_346,
Drosophila melanogaster FBgn0033184 ortholog_one2many 1 retrogene
retro_dmel_52,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1174 85.33 72.75
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Download FASTA sequences of all ENSPTRG00000007939 retrocopies